Commit Graph

71 Commits

Author SHA1 Message Date
Fusion 965f6f6585 feat: add git control tests and mark all tasks complete
- Add integration tests for git control utilities
- Test status, branch operations, and commit functionality
- All 9 tests passing
2026-05-19 15:10:31 +02:00
Fusion 762e0de44c feat: add git control endpoints (status, branch, commit, fetch, pull, push, merge)
- Add GitStatus dataclass and git control utilities
- Add endpoints:
  - GET /status - working directory status
  - POST /branches - create branch
  - DELETE /branches/{name} - delete branch
  - POST /checkout - checkout branch
  - POST /commit - commit changes
  - POST /fetch - fetch from remote
  - POST /pull - pull updates
  - POST /push - push changes
  - POST /merge - merge branches

Quality gates: ruff ✓, mypy ✓
2026-05-19 14:49:22 +02:00
Fusion 6807f449b7 feat: add repository workspace as default project view
- Create git file utilities (list_tree, get_file_content, list_branches, commit_file)
- Add file browsing API endpoints (list, content, branches, update)
- Create RepoWorkspace page with sidebar + main content layout
- Add FileTree component with directory navigation
- Add FileViewer component for viewing file contents
- Update project list to link to workspace
- Add workspace CSS styles
- Update router with workspace route

Quality gates: ruff ✓, mypy ✓, typecheck ✓, build ✓
2026-05-19 13:43:49 +02:00
Fusion 92d0d5b891 fix: don't combine --all with branch name in git log
Using 'git log --all <branch>' creates ambiguous behavior. Now:
- Without branch: uses --all to show all commits from all refs
- With branch: shows only commits from that specific branch

This ensures consistent commit counts between git CLI and API.
2026-05-19 13:19:36 +02:00
Fusion 9873a8186a fix: send ISO format dates instead of Unix timestamps
Backend was sending Unix timestamps as strings (e.g. '1716112800')
which JavaScript Date couldn't parse. Now sends proper ISO 8601
format dates that work with new Date() in the browser.
2026-05-19 13:10:10 +02:00
Fusion d4b52668aa fix: align backend commit response with frontend expectations
Backend was returning fields like 'author', 'email', 'date' but frontend
expected 'author_name', 'author_email', 'author_date'. Also 'branches' and
'tags' were separate but frontend expects unified 'refs' array.

- Update _commit_to_dict to return frontend-compatible field names
- Add graph_symbol and graph_depth for commit graph display
- Update get_commit_detail to return matching field names
- Include diff as top-level field for detail view
2026-05-19 13:04:49 +02:00
Fusion d0191cd549 fix: use NULL bytes as git log format separators
The git log --graph output uses | characters in the ASCII art,
which conflicts with using | as a format separator. Switch to
NULL bytes (\x00) which won't appear in commit data.

Also removed --graph flag since we build graph data from
parent relationships instead.
2026-05-19 13:00:22 +02:00
Fusion 0ae0e3fec1 feat: add git history backend implementation
- Add git_history.py utility for extracting commit history and details
- Add API endpoints for repository history and commit details
- Integrate with existing git_repositories router

This completes the backend for git history visualization.
2026-05-19 12:50:57 +02:00
Fusion 8b70daed53 feat: smart git URL parsing for browser URLs
- Add git URL parsing utilities (extract_base_repo_url, parse_git_url)
- Support GitHub, GitLab, Bitbucket browser URL detection
- Add /projects/repositories/parse-url endpoint
- Enhance repository creation to detect browser URLs and suggest corrections
- Add real-time URL validation in frontend with debouncing
- Show visual indicators (green/yellow/red) for URL validity
- Display inline suggestions with 'Use Suggested' button
- Add comprehensive unit tests for URL parsing
- Quality gates: ruff ✓, mypy ✓, typecheck ✓, lint ✓, build ✓
2026-05-19 12:25:44 +02:00
Fusion ac6c97b6ce fix: add missing timestamps to ssh_keys model
SSHKey model was missing created_at/updated_at columns which the API
response model expected. Add TimestampMixin and Alembic migration.
2026-05-19 11:51:39 +02:00
Fusion a433c82488 fix: datetime serialization in API response models
Tool types and git repositories response models declared created_at/
updated_at as str but ORM returns datetime objects. Change to datetime
type so Pydantic serializes correctly to ISO format strings.
2026-05-19 11:42:14 +02:00
Fusion f8700fd7ed fix: dashboard endpoint and SSH key Fernet key generation
- Create missing /dashboard/summary endpoint that frontend expects
- Fix SSH key Fernet key generation to use proper base64 encoding
  (was using raw session secret slice which failed validation)
2026-05-19 11:38:25 +02:00
Fusion 0fcfc745ff fix: add alias=session to Cookie dependencies
FastAPI uses parameter name as cookie name by default.
get_current_user_id was looking for 'session_cookie' but we set
the cookie as 'session'. Add alias='session' to match.
2026-05-19 10:56:11 +02:00
Fusion d214ab82db debug: add logging to auth cookie handling
Add debug logging to understand why /auth/me succeeds but
/users/me/config fails with 401.
2026-05-19 10:52:33 +02:00
Fusion 753f1506b6 fix: wrap /auth/me response in user object to match frontend types
Frontend expects {user: {id, email, name, avatar_url}} but backend
was returning flat object. This caused auth state to fail parsing.
2026-05-19 10:43:18 +02:00
Fusion 58bf30ed15 fix: set cookie domain for cross-subdomain authentication
In production, the session cookie needs to be shared across
subdomains (e.g., api.example.com and app.example.com).

- Add cookie_domain property to config (extracts parent domain)
- Set SameSite=None for cross-origin requests in production
- Update auth callback and logout to use cookie domain
- This fixes the login loop where session cookie wasn't sent
2026-05-18 23:33:59 +02:00
Fusion c067c03662 fix: add CORS middleware to allow frontend auth requests
Add CORSMiddleware configured to:
- Allow the frontend origin (web_base_url)
- Allow credentials (cookies)
- Allow all methods and headers

This fixes cross-origin requests between frontend and API
when they're on different subdomains.
2026-05-18 23:27:11 +02:00
Fusion d273535950 fix: redirect to frontend after OAuth callback instead of returning JSON
- /auth/callback now redirects to frontend URL with session cookie
- /auth/login stores 'next' path in cookie for post-login redirect
- User is redirected to their original destination after authentication
2026-05-18 23:22:25 +02:00
Fusion 7f97ba8e9b fix: make migrations idempotent with if_not_exists
Add if_not_exists=True to CREATE TABLE operations in migrations
0003 and 0004. This prevents DuplicateTableError when migrations
are re-run on databases where tables were partially created.
2026-05-18 23:18:11 +02:00
Fusion caf73e39ba fix: use subprocess for alembic migrations to avoid async/sync issues
SQLAlchemy 2.0 async engines conflict with alembic's sync context manager.
Instead of trying to bridge async/sync, use subprocess to run
'alembic upgrade head' directly. This is simpler and more reliable.

- Remove psycopg2-binary dependency (no longer needed)
- Simplify init_database to use subprocess.run()
- Remove all sync engine code
2026-05-18 23:16:01 +02:00
Fusion 1e70462c2b fix: use sync engine for alembic migration operations
SQLAlchemy 2.0 async engines don't support the sync context manager
protocol needed by alembic. Create a separate sync engine (using
psycopg2) for migration operations while keeping async engine for
application queries.

- Add psycopg2-binary dependency
- Rename async connection variable to avoid mypy confusion
- Use sync engine for MigrationContext and alembic commands
2026-05-18 23:09:44 +02:00
Fusion b9684b0107 fix: fail fast on startup if database migrations fail
- Exit with error code 1 if init_database() returns False
- Update health check to verify database connectivity
- Prevents confusing 'table does not exist' errors later
2026-05-18 23:05:30 +02:00
Fusion 2ce7862058 feat: simplify auth flow - replace JWT with session cookies
Replace complex JWT + refresh token authentication with simple
session-based auth using signed cookies.

**Removed:**
- JWT token service (jwt_service.py)
- Refresh token store (refresh_store.py)
- Refresh token model and database table
- JWKS fetching and OIDC token verification
- python-jose dependency

**Added:**
- Session service (session.py) with HMAC-SHA256 signed cookies
- Auth dependencies module for shared auth logic
- Session-based auth endpoints

**Updated:**
- All API endpoints to use session-based auth
- Config: removed JWT settings, added SESSION_SECRET/SESSION_TTL_HOURS
- Tests: rewritten for session-based flow
- Frontend: no changes needed (already uses cookies)

Quality gates: ruff ✓, mypy ✓, typecheck ✓, lint ✓
2026-05-18 22:54:53 +02:00
Fusion 285d3dace8 fix: use await engine.connect() instead of async with
SQLAlchemy 2.0 async engine.connect() doesn't support context manager.
Use explicit connect/close instead.
2026-05-18 22:38:08 +02:00
Fusion 9fefe289a7 fix: prevent concurrent migrations in multi-worker setup
Add migration version check before running alembic upgrade to prevent
multiple uvicorn workers from running migrations simultaneously.

- Check current vs head revision before running migrations
- Skip migration if already at latest version
- Log current and head revision for debugging
2026-05-18 22:35:42 +02:00
Fusion 843683d579 feat: add comprehensive request and error logging
Add logging infrastructure:
- RequestLoggingMiddleware: logs all requests with method, path, status, timing
- ExceptionLoggingMiddleware: catches and logs unhandled exceptions with stack traces
- configure_logging(): structured logging with configurable level via LOG_LEVEL env var

Add detailed auth flow logging:
- Login initiation
- Token exchange success/failure
- JWKS fetch success/failure
- Token verification
- User lookup/creation
- Database errors
- Final response

This enables tracing Internal Server Errors through the logs.
2026-05-18 22:22:56 +02:00
Fusion ea6c466c6c feat: add automatic database initialization and recovery
- Add init_database() with alembic programmatic API and retry logic
- Add connection retry with exponential backoff (5 attempts)
- Improve error messages for connection/auth failures
- Add table existence check before seeding data
- Update startup event to run migrations before seeding
- Add wait-for-db.sh script for Docker containers
- Update Docker and docker-compose configurations

Quality gates: ruff ✓, mypy ✓, unit tests (8 passed)
2026-05-18 22:10:15 +02:00
Fusion 29c3563148 fix: correct down_revision reference in user_configs migration
0003_user_configs was referencing '0002' but 0002_refresh_tokens
has revision ID '0002_refresh_tokens'. Fix the chain.
2026-05-18 21:55:54 +02:00
Fusion 0509b9eb4a fix: separate Authentik application slug from OAuth client ID
Authentik uses different values for:
- OAuth Client ID (UUID for authentication)
- Application Slug (URL-friendly identifier like 'headquarter-web')

Add AUTHENTIK_APPLICATION_SLUG config to build correct Authentik URLs
while keeping AUTHENTIK_CLIENT_ID for OAuth token exchange.
2026-05-18 21:46:54 +02:00
Fusion 137757602f fix: make refresh_token optional in OIDC token exchange
Authentik may not return a refresh_token in the authorization_code
response. Use .get() instead of direct dict access to prevent KeyError.
2026-05-18 21:41:13 +02:00
Fusion 3cd8674c31 fix: add /health endpoint for health checks
Add simple health check endpoint that returns {status: healthy}.
Needed for Traefik health checks and monitoring.
2026-05-18 21:36:39 +02:00
Fusion 899fba9c9b fix: handle missing tool_types table gracefully on startup
Catch ProgrammingError when tool_types table doesn't exist yet
(during fresh database setup). Log warning and skip seeding instead
of crashing.
2026-05-18 21:29:48 +02:00
Fusion 6dbd55a9ac fix: correct uvicorn module path in Dockerfile
main.py is located at src/main.py, not at the root.
Changed CMD from 'main:app' to 'src.main:app' to fix ASGI import error.
2026-05-18 17:53:40 +02:00
Fusion 7b72ccdc3c docs: sync tool-types-definition specs and mark tasks complete
- Mark manual testing tasks as complete in tool-types-definition
- Sync tool-types-definition spec to main specs directory
2026-05-18 17:10:23 +02:00
Fusion 6b302b3279 feat: implement tool types definition system
- Add ToolType SQLAlchemy model with Docker Compose template support
- Create CRUD API endpoints for tool type management
- Implement YAML and template variable validation
- Add built-in tool types (code-server, jupyter-notebook) seeded on startup
- Create frontend page with list, create, edit, and delete functionality
- Add tool types navigation to app shell
- Update mypy config to ignore missing imports

Quality gates: ruff (passed), mypy (passed), pytest unit (8 passed),
typecheck (passed), lint (passed), build (passed)
2026-05-18 16:27:19 +02:00
Fusion 94254ee3fd feat: complete user config management
- Add theme support with dark/light/system modes
- Add useTheme hook for applying user config theme
- Update router to use SettingsPage
- Update app-shell to apply theme on load
- Add CSS variables for dark theme
- Fix mypy errors in user_config.py
- Quality gates pass: ruff, mypy, typecheck, lint, build
2026-05-18 15:58:01 +02:00
Fusion 4e2edb1d93 feat: implement git repository management
- Add backend API for git repository CRUD (create, list, delete)
- Support bare repository initialization and mirror cloning
- Add cascade delete for repositories when project is deleted
- Add frontend page for repository management per project
- Update project page with link to repositories
- Add repo_base_path to config
- Quality gates: ruff, mypy, typecheck, lint, build all pass
2026-05-18 15:47:42 +02:00
Fusion b179319601 fix: resolve failing unit tests after test infrastructure migration
- Update test_config.py: account for conftest.py DATABASE_URL override
- Update test_migration_metadata.py: correct alembic path resolution
  (alembic/ is at project root, not under src/)
2026-05-18 15:27:48 +02:00
Fusion 4299c64922 refactor: remove duplicate fixtures and add SQLite support
Task 2.5: Remove duplicate fixtures from integration tests
- test_auth_api.py, test_auth_services.py, test_models.py
- test_projects_api.py, test_seed.py, test_users_api.py
- Fix npytest typos in all test files

Task 3.2: Update SQLAlchemy configuration for SQLite
- Use generic Uuid type instead of PostgreSQL-specific UUID
- Use generic JSON type instead of PostgreSQL-specific JSONB
- Update database.py to handle SQLite connection args

Unit tests now run without PostgreSQL (5/8 passing)
2026-05-18 15:14:46 +02:00
Fusion 3ccd94f661 feat: restructure test infrastructure with unit/integration/system separation
Test Organization:
- Create tests/unit/, tests/integration/, tests/system/ directories
- Move existing tests into appropriate categories
- Add pytest markers (@pytest.mark.unit, @pytest.mark.integration)

Shared Fixtures:
- Create conftest.py with SQLite engine (for unit tests)
- Add PostgreSQL session fixture with transaction rollback
- Add TestClient fixture for API tests

Configuration:
- Update pyproject.toml with asyncio_mode=auto
- Add test markers and default addopts
- Add aiosqlite dependency for SQLite support

E2E Testing:
- Initialize Playwright in e2e/ directory
- Add playwright.config.ts
- Create login flow E2E test

Build:
- Add test-unit, test-integration, test-system, test-e2e to Makefile
- Update test target to run all categories
- Add testing documentation to README

Note: Some tests have import issues due to missing python-jose
package in dev environment. This needs to be addressed separately.
2026-05-18 15:00:33 +02:00
Fusion a441ea2fac feat: implement SSH key management
- Add backend API endpoints for SSH key CRUD (POST, GET, DELETE)
- Implement Ed25519 key generation with Fernet-encrypted private keys
- Add frontend SSH keys page with generate, list, and delete functionality
- Include copy-to-clipboard for public keys
- Add responsive CSS styles for key cards
- Register ssh_keys router in main.py
- Add basic auth tests for SSH key endpoints

Quality gates: ruff ✓, mypy ✓, typecheck ✓, lint ✓
2026-05-18 14:44:21 +02:00
Fusion 577b052c05 feat: implement user profile management and oauth/traefik integration
User Profile (US-004):
- Add authenticated profile endpoints (GET/PUT /users/me)
- Add avatar upload with file validation (PNG/JPEG, max 2MB)
- Create frontend profile page with edit form and avatar upload
- Update app shell to link to profile page

OAuth/Traefik Integration:
- Externalize all Authentik URLs to environment variables
- Add domain configuration (API_DOMAIN, WEB_DOMAIN, AUTHENTIK_DOMAIN)
- Create docker-compose.traefik.yml for reverse proxy deployment
- Update OAuth redirect/callback URLs to use configured domains
- Add VITE_APP_URL for frontend public URL configuration

Quality gates: pytest (50 passed), ruff, mypy, npm test (12 passed), typecheck, lint, build
2026-05-17 23:17:10 +02:00
alex 71d9fe6406 feat: implement auth, projects, and frontend foundation 2026-05-17 20:21:55 +00:00
alex e7819bfc82 feat: implement docker infrastructure (US-001)
- Add docker-compose.yml with postgres, redis, api, and web services
- Add multi-stage Dockerfile for API (Python 3.11)
- Add multi-stage Dockerfile for web (Node.js 20 + nginx)
- Add Makefile with common development commands
- Add .env.example with all required environment variables
- Add placeholder pyproject.toml and package.json for builds
- Configure health checks for all services
- Setup persistent volumes for postgres, redis, and repos
- Run services as non-root users
2026-05-16 17:44:39 +00:00
alex 082e8d03ff auth fixes 2026-05-16 14:57:55 +00:00
alex 3728c245d3 feat(FN-007): implement repository connection API and git operations
- Add GitHubAdapter and GitLabAdapter with URL parsing
- Create provider factory in apps/api/app/git/providers/
- Implement clone, fetch, push in LocalGitOperations
- Add repository_connections router with CRUD and SSH key endpoints
- Create RepositoryConnection schema with validation
- Update models and routers __init__.py for new components
- Add comprehensive tests for git operations
2026-05-16 13:41:37 +02:00
alex 25db3f81b0 feat(FN-007): implement credential storage with Fernet encryption
- Add DatabaseCredentialStorage with async CRUD operations
- Create Credential SQLAlchemy model with encrypted values
- Update GitCredential and AccessTokenCredential to support async
- Fix SSH key encryption to use Fernet instead of base64 placeholder
2026-05-16 13:41:07 +02:00
alex 51d93d9dc6 feat(FN-009): implement config and secrets management with runtime injection
- Add RuntimeInjectionService for scope-based config/secret resolution
- Mount configs as JSON files at /app/config/ with 0400 permissions
- Inject secrets as environment variables with uppercase keys
- Implement scope hierarchy: instance > project > user > global
- Create ConfigListPage and SecretListPage frontend components
- Mask secret values in API responses (never expose decrypted)
- Validate secrets exist before spawning containers
- Add comprehensive tests for runtime injection service
- Update documentation with config/secrets workflow
2026-05-15 16:44:26 +02:00
alex 85ae390263 chore: add frontend dependencies and update test fixtures
- Add react-router-dom, @tanstack/react-query, zustand, @headlessui/react
- Update pnpm workspace configuration
- Update test fixtures to reference OpenCode instead of RunFusion
- Add frontend environment variable examples
- Update .gitignore for .opencode and .sisyphus directories
2026-05-14 17:30:41 +02:00
alex 6aea953734 feat(FN-010): implement code-server spawn service with Docker Compose
- Add SpawnService with container lifecycle (spawn/stop/status)
- Generate Docker Compose services from tool manifests
- Integrate Traefik label generation with subdomain routing
- Mount workspace, config, and SSH key volumes
- Add container status polling and health checks
- Enhance tool instance API with spawn/stop/start/status endpoints
- Add Traefik forwardAuth middleware for auth proxy
- Update code-server manifest with runtime configuration
2026-05-14 17:27:19 +02:00