feat: allow creating external repositories directly from git mount editor

- Add createExternalRepository API function
- Update GitMountEditor with "+ Add new repository..." option
- Show form to enter repo name and remote URL
- Auto-create external repo and refresh list on success
- Update config-profiles page to pass onCreateRepository handler

apps/api/src/api/git_repositories.py

@@ -222,7 +222,7 @@ class GitRepositoryResponse(BaseModel):
     id: uuid.UUID
     name: str
     path: str
-    project_id: uuid.UUID
+    project_id: uuid.UUID | None
     owner_id: uuid.UUID
     is_mirror: bool
     remote_url: str | None
@@ -345,6 +345,112 @@ async def parse_repository_url(data: URLParseRequest) -> URLParseResponse:
     return URLParseResponse(**result)
 
 
+@router.post(
+    "/repositories",
+    response_model=GitRepositoryResponse,
+    status_code=status.HTTP_201_CREATED,
+    summary="Create an external repository",
+    description="Create a new external git repository (not tied to any project). Can clone from remote URL.",
+)
+async def create_external_repository(
+    data: GitRepositoryCreate,
+    user_id: uuid.UUID = Depends(get_current_user_id),
+    session: AsyncSession = Depends(get_db_session),
+) -> GitRepository:
+    """Create a new external git repository.
+
+    External repositories are not tied to any project and can be used
+    across all projects for config profile git mounts.
+
+    Args:
+        data: Repository creation data including name and optional remote URL.
+        user_id: ID of the authenticated user.
+        session: Database session.
+
+    Returns:
+        The newly created external repository.
+    """
+    _user = await _get_user(session, user_id)
+
+    # Check for duplicate name (external repos only)
+    existing = await session.execute(
+        select(GitRepository).where(
+            GitRepository.project_id.is_(None),
+            GitRepository.owner_id == user_id,
+            GitRepository.name == data.name,
+        )
+    )
+    if existing.scalar_one_or_none():
+        raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="repository name already exists")
+
+    # Validate and potentially correct the URL
+    remote_url = data.remote_url
+    if remote_url and not data.force_original_url:
+        parse_result = parse_git_url(remote_url)
+        if parse_result["needs_parsing"] and parse_result["base_url"]:
+            raise HTTPException(
+                status_code=status.HTTP_422_UNPROCESSABLE_ENTITY,
+                detail={
+                    "message": "The provided URL appears to be a browser URL, not a git clone URL",
+                    "suggested_url": parse_result["base_url"],
+                    "original_url": remote_url,
+                    "error_code": "URL_NEEDS_PARSING",
+                },
+            )
+        if parse_result["base_url"]:
+            remote_url = parse_result["base_url"]
+
+    # Validate SSH key if provided
+    ssh_key_id = None
+    ssh_key = None
+    if data.ssh_key_id:
+        try:
+            ssh_key_id = uuid.UUID(data.ssh_key_id)
+        except ValueError:
+            raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="invalid ssh_key_id format")
+        
+        ssh_key = await session.get(SSHKey, ssh_key_id)
+        if ssh_key is None:
+            raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="ssh key not found")
+        if ssh_key.user_id != user_id:
+            raise HTTPException(status_code=status.HTTP_403_FORBIDDEN, detail="ssh key does not belong to user")
+
+    if remote_url:
+        _preflight_remote_repository(remote_url, ssh_key)
+
+    # Create external repo with no project
+    repo = GitRepository(
+        name=data.name,
+        path="",  # Will be set after clone
+        project_id=None,
+        owner_id=user_id,
+        remote_url=remote_url,
+        ssh_key_id=ssh_key_id,
+    )
+    session.add(repo)
+    await session.flush()
+
+    # Set path and optionally clone
+    repo_path = f"/data/repos/external/{user_id}/{repo.id}"
+    repo.path = repo_path
+
+    if remote_url:
+        try:
+            _clone_working_repository(remote_url, repo_path, ssh_key)
+            repo.is_mirror = False
+        except Exception as exc:
+            await session.rollback()
+            raise HTTPException(status_code=status.HTTP_500_INTERNAL_SERVER_ERROR, detail=f"Failed to clone repository: {exc}")
+    else:
+        # Initialize empty repo
+        os.makedirs(repo_path, exist_ok=True)
+        subprocess.run(["git", "init", repo_path], check=True, capture_output=True)
+        repo.is_mirror = False
+
+    await session.commit()
+    return repo
+
+
 @router.post(
     "/{project_id}/repositories",
     response_model=GitRepositoryResponse,

apps/api/src/api/tool_instances.py

@@ -150,6 +150,15 @@ async def _resolve_single_git_mount(
                 repo_id, repo_path
             )
             return []
+    else:
+        # Repo exists - pull latest updates
+        if repo.remote_url:
+            try:
+                await asyncio.to_thread(_pull_repository_updates, repo_path, repo.remote_url)
+                logger.info("Pulled updates for repository %s", repo.name)
+            except Exception as exc:
+                logger.warning("Failed to pull updates for repository %s: %s", repo.name, exc)
+                # Continue with existing code as fallback
     
     # Handle branch checkout if specified
     if branch and repo_path:
@@ -225,6 +234,35 @@ def _checkout_branch(repo_path: str, branch: str) -> None:
             raise RuntimeError(f"Failed to checkout branch {branch}: {result.stderr}")
 
 
+def _pull_repository_updates(repo_path: str, remote_url: str) -> None:
+    """Pull latest updates from remote repository.
+    
+    Used when starting a new container with an existing cloned repository
+    to ensure the latest code is mounted.
+    """
+    import subprocess
+    
+    # Fetch latest changes
+    result = subprocess.run(
+        ["git", "-C", repo_path, "fetch", "origin"],
+        capture_output=True,
+        text=True,
+    )
+    
+    if result.returncode != 0:
+        raise RuntimeError(f"Failed to fetch updates: {result.stderr}")
+    
+    # Pull changes for current branch
+    result = subprocess.run(
+        ["git", "-C", repo_path, "pull", "origin"],
+        capture_output=True,
+        text=True,
+    )
+    
+    if result.returncode != 0:
+        raise RuntimeError(f"Failed to pull updates: {result.stderr}")
+
+
 def _expand_glob_source(source_path: str, repo_path: str) -> list[str]:
     """Expand glob patterns in source path.
     

apps/web/src/api/git_repositories.ts

@@ -35,8 +35,15 @@ export async function parseGitUrl(url: string): Promise<URLParseResult> {
   return response.data;
 }
 
-export async function listRepositories(projectId: string): Promise<GitRepository[]> {
-  const response = await apiClient.get(`/projects/${projectId}/repositories`);
+export async function listRepositories(projectId?: string): Promise<GitRepository[]> {
+  if (projectId) {
+    const response = await apiClient.get<GitRepository[]>(
+      `/projects/${projectId}/repositories`
+    );
+    return response.data;
+  }
+  // List all user repositories (including external)
+  const response = await apiClient.get<GitRepository[]>("/repositories");
   return response.data;
 }
 
@@ -53,6 +60,13 @@ export async function createRepository(
   return response.data;
 }
 
+export async function createExternalRepository(
+  data: GitRepositoryCreate
+): Promise<GitRepository> {
+  const response = await apiClient.post<GitRepository>("/repositories", data);
+  return response.data;
+}
+
 export async function deleteRepository(projectId: string, repoId: string): Promise<void> {
   await apiClient.delete(`/projects/${projectId}/repositories/${repoId}`);
 }

apps/web/src/components/git-mount-editor.tsx

@@ -7,9 +7,10 @@ interface GitMountEditorProps {
   mounts: GitMount[];
   repositories: GitRepository[];
   onChange: (mounts: GitMount[]) => void;
+  onCreateRepository?: (name: string, remoteUrl: string) => Promise<GitRepository>;
 }
 
-export const GitMountEditor = ({ mounts, repositories, onChange }: GitMountEditorProps) => {
+export const GitMountEditor = ({ mounts, repositories, onChange, onCreateRepository }: GitMountEditorProps) => {
   const [editingIndex, setEditingIndex] = useState<number | null>(null);
   const [newMount, setNewMount] = useState<GitMount>({
     repo_id: "",
@@ -58,6 +59,7 @@ export const GitMountEditor = ({ mounts, repositories, onChange }: GitMountEdito
                   onSave={(updated) => handleUpdate(index, updated)}
                   onCancel={() => setEditingIndex(null)}
                   validatePath={validatePath}
+                  onCreateRepository={onCreateRepository}
                 />
               ) : (
                 <div className="git-mount-display">
@@ -105,6 +107,7 @@ export const GitMountEditor = ({ mounts, repositories, onChange }: GitMountEdito
           onSave={handleAdd}
           onCancel={() => setNewMount({ repo_id: "", source_path: ".", target_path: "", branch: "" })}
           validatePath={validatePath}
+          onCreateRepository={onCreateRepository}
           isNew
         />
       </div>
@@ -118,12 +121,17 @@ interface GitMountFormProps {
   onSave: (mount: GitMount) => void;
   onCancel: () => void;
   validatePath: (path: string, isTarget: boolean) => string | null;
+  onCreateRepository?: (name: string, remoteUrl: string) => Promise<GitRepository>;
   isNew?: boolean;
 }
 
-const GitMountForm = ({ mount, repositories, onSave, onCancel, validatePath, isNew }: GitMountFormProps) => {
+const GitMountForm = ({ mount, repositories, onSave, onCancel, validatePath, onCreateRepository, isNew }: GitMountFormProps) => {
   const [form, setForm] = useState<GitMount>({ ...mount });
   const [errors, setErrors] = useState<Record<string, string>>({});
+  const [isCreatingRepo, setIsCreatingRepo] = useState(false);
+  const [newRepoName, setNewRepoName] = useState("");
+  const [newRepoUrl, setNewRepoUrl] = useState("");
+  const [isSubmitting, setIsSubmitting] = useState(false);
 
   const handleChange = (field: keyof GitMount, value: string) => {
     setForm((prev) => ({ ...prev, [field]: value }));
@@ -136,6 +144,26 @@ const GitMountForm = ({ mount, repositories, onSave, onCancel, validatePath, isN
     }
   };
 
+  const handleCreateRepo = async () => {
+    if (!onCreateRepository || !newRepoName.trim() || !newRepoUrl.trim()) return;
+    
+    setIsSubmitting(true);
+    try {
+      const repo = await onCreateRepository(newRepoName.trim(), newRepoUrl.trim());
+      handleChange("repo_id", repo.id);
+      setIsCreatingRepo(false);
+      setNewRepoName("");
+      setNewRepoUrl("");
+    } catch (err) {
+      setErrors((prev) => ({
+        ...prev,
+        repo_id: err instanceof Error ? err.message : "Failed to create repository",
+      }));
+    } finally {
+      setIsSubmitting(false);
+    }
+  };
+
   const handleSubmit = () => {
     const newErrors: Record<string, string> = {};
     
@@ -164,19 +192,71 @@ const GitMountForm = ({ mount, repositories, onSave, onCancel, validatePath, isN
     <div className="git-mount-form">
       <div className="form-row">
         <label>Repository</label>
-        <select
-          value={form.repo_id}
-          onChange={(e) => handleChange("repo_id", e.target.value)}
-          className={errors.repo_id ? "error" : ""}
-        >
-          <option value="">Select a repository...</option>
-          {repositories.map((repo) => (
-            <option key={repo.id} value={repo.id}>
-              {repo.name}
-            </option>
-          ))}
-        </select>
-        {errors.repo_id && <span className="error-text">{errors.repo_id}</span>}
+        {!isCreatingRepo ? (
+          <>
+            <select
+              value={form.repo_id}
+              onChange={(e) => {
+                if (e.target.value === "__new__") {
+                  setIsCreatingRepo(true);
+                } else {
+                  handleChange("repo_id", e.target.value);
+                }
+              }}
+              className={errors.repo_id ? "error" : ""}
+            >
+              <option value="">Select a repository...</option>
+              {repositories.map((repo) => (
+                <option key={repo.id} value={repo.id}>
+                  {repo.name}
+                </option>
+              ))}
+              {onCreateRepository && (
+                <option value="__new__">+ Add new repository...</option>
+              )}
+            </select>
+            {errors.repo_id && <span className="error-text">{errors.repo_id}</span>}
+          </>
+        ) : (
+          <div className="new-repo-form">
+            <input
+              type="text"
+              value={newRepoName}
+              onChange={(e) => setNewRepoName(e.target.value)}
+              placeholder="Repository name"
+              disabled={isSubmitting}
+            />
+            <input
+              type="text"
+              value={newRepoUrl}
+              onChange={(e) => setNewRepoUrl(e.target.value)}
+              placeholder="https://github.com/user/repo.git"
+              disabled={isSubmitting}
+            />
+            <div className="new-repo-actions">
+              <button
+                type="button"
+                className="primary-button small"
+                onClick={handleCreateRepo}
+                disabled={isSubmitting || !newRepoName.trim() || !newRepoUrl.trim()}
+              >
+                {isSubmitting ? "Creating..." : "Create Repository"}
+              </button>
+              <button
+                type="button"
+                className="secondary-button small"
+                onClick={() => {
+                  setIsCreatingRepo(false);
+                  setNewRepoName("");
+                  setNewRepoUrl("");
+                }}
+                disabled={isSubmitting}
+              >
+                Cancel
+              </button>
+            </div>
+          </div>
+        )}
       </div>
 
       <div className="form-row">
@@ -226,4 +306,4 @@ const GitMountForm = ({ mount, repositories, onSave, onCancel, validatePath, isN
       </div>
     </div>
   );
-};
+};

apps/web/src/pages/config-profiles.tsx

@@ -19,7 +19,7 @@ import {
   type ResolvedProfile,
 } from "../api/config_profiles";
 import { listProjects } from "../api/projects";
-import { listAllUserRepositories, type GitRepository } from "../api/git_repositories";
+import { listAllUserRepositories, createExternalRepository, type GitRepository } from "../api/git_repositories";
 import type { Project } from "../types";
 import { listToolTypes, type ToolType } from "../api/tool_types";
 import { GitMountEditor } from "../components/git-mount-editor";
@@ -1259,6 +1259,14 @@ export const ConfigProfilesPage = () => {
                   mounts={formData.git_mounts || []}
                   repositories={repositories}
                   onChange={(git_mounts) => updateFormField("git_mounts", git_mounts)}
+                  onCreateRepository={async (name, remoteUrl) => {
+                    const repo = await createExternalRepository({
+                      name,
+                      remote_url: remoteUrl,
+                    });
+                    setRepositories((prev) => [...prev, repo]);
+                    return repo;
+                  }}
                 />
               </div>
 

apps/web/src/styles.css

@@ -4131,3 +4131,28 @@ a.nav-item,
   margin-top: 0.5rem;
 }
 
+.new-repo-form {
+  display: flex;
+  flex-direction: column;
+  gap: 0.5rem;
+  padding: 0.75rem;
+  background: var(--bg);
+  border: 1px solid var(--border);
+  border-radius: 0.375rem;
+}
+
+.new-repo-form input {
+  padding: 0.5rem;
+  border: 1px solid var(--border);
+  border-radius: 0.375rem;
+  background: var(--surface);
+  color: var(--text);
+  font-size: 0.875rem;
+}
+
+.new-repo-actions {
+  display: flex;
+  gap: 0.5rem;
+  margin-top: 0.25rem;
+}
+

docs/api/repositories.md

@@ -8,6 +8,73 @@ All endpoints require authentication (session cookie).
 
 ---
 
+## GET /repositories
+
+**Description:** List all repositories owned by the user, including external repositories not tied to any project.
+
+### Response
+
+#### Success (200 OK)
+
+```json
+[
+  {
+    "id": "uuid",
+    "name": "my-external-repo",
+    "remote_url": "https://github.com/user/repo.git",
+    "is_mirror": false,
+    "project_id": null,
+    "owner_id": "uuid",
+    "created_at": "2024-01-01T00:00:00Z"
+  }
+]
+```
+
+---
+
+## POST /repositories
+
+**Description:** Create a new external repository (not tied to any project). External repositories can be used across all projects for config profile git mounts.
+
+### Request
+
+#### Request Body
+
+```json
+{
+  "name": "my-external-repo",
+  "remote_url": "https://github.com/user/repo.git",
+  "ssh_key_id": "uuid"
+}
+```
+
+| Field | Type | Required | Description |
+|-------|------|----------|-------------|
+| `name` | `string` | Yes | Repository name (unique per user for external repos) |
+| `remote_url` | `string` | No | Remote URL to clone from |
+| `ssh_key_id` | `string` | No | SSH key ID for authentication |
+| `force_original_url` | `boolean` | No | Skip URL parsing (default: false) |
+
+### Response
+
+#### Success (201 Created)
+
+```json
+{
+  "id": "uuid",
+  "name": "my-external-repo",
+  "path": "/data/repos/external/{user_id}/{repo_id}",
+  "remote_url": "https://github.com/user/repo.git",
+  "is_mirror": false,
+  "project_id": null,
+  "owner_id": "uuid",
+  "ssh_key_id": "uuid",
+  "created_at": "2024-01-01T00:00:00Z"
+}
+```
+
+---
+
 ## GET /projects/{project_id}/repositories
 
 **Description:** List repositories in a project.

openspec/changes/config-profile-git-mounts/specs/config-profile-git-mounts/spec.md

@@ -14,7 +14,8 @@ The system SHALL allow config profiles to include git repository mounts that bin
 #### Scenario: Git mount validation
 - **WHEN** a profile with git mounts is saved
 - **THEN** the system validates that:
-  - The referenced repository exists and belongs to the user's project
+  - The referenced repository exists and is owned by the user
+  - Repositories can be external (not tied to any project) or project-based
   - `source_path` is a relative path (no leading `/`)
   - `target_path` is an absolute path (starts with `/`)
   - `target_path` does not contain path traversal sequences (`..`)
@@ -59,15 +60,22 @@ The system SHALL support glob patterns in `source_path` for matching multiple fi
 - **AND** logs a warning: "Glob pattern matched 500 files, limited to 100"
 
 ### Requirement: Git mounts trigger automatic cloning
-The system SHALL automatically clone referenced repositories if they do not exist locally.
+The system SHALL automatically clone referenced repositories to a persistent storage location on every new container creation. Each instance gets its own fresh clone.
 
-#### Scenario: Repository not cloned at startup
-- **GIVEN** a git mount referencing a repository that has not been cloned
-- **WHEN** the instance is started
-- **THEN** the system triggers a clone operation using the repository's remote URL and SSH key
+#### Scenario: Repository cloned on container creation
+- **GIVEN** a git mount referencing a repository
+- **WHEN** a new container is created with this profile
+- **THEN** the system clones the repository to a persistent location: `/data/repos/<user_id>/<repo_name>.git`
 - **AND** the clone proceeds asynchronously
 - **AND** instance startup continues once clone completes
 
+#### Scenario: Existing clone updated on new container creation
+- **GIVEN** a repository that was previously cloned to the persistent location
+- **WHEN** a new container is created with this profile
+- **THEN** the system pulls the latest updates from the remote
+- **AND** checks out the specified branch (or default branch if not specified)
+- **AND** uses the updated clone for the bind mount
+
 #### Scenario: Clone failure handling
 - **GIVEN** a git mount referencing a repository with an invalid SSH key
 - **WHEN** the instance attempts to clone
@@ -76,6 +84,12 @@ The system SHALL automatically clone referenced repositories if they do not exis
 - **AND** the mount is skipped
 - **AND** instance startup continues with remaining mounts
 
+#### Scenario: Per-instance isolation
+- **GIVEN** a git mount referencing a repository
+- **WHEN** multiple instances are created using the same profile
+- **THEN** each instance gets its own independent clone
+- **AND** changes made in one container do not affect other containers
+
 ### Requirement: Git mounts support branch pinning
 The system SHALL support pinning git mounts to specific branches or tags.
 
@@ -107,7 +121,7 @@ The system SHALL display git mounts in the config profile editor.
 #### Scenario: Add git mount via UI
 - **WHEN** a user adds a git mount in the profile editor
 - **THEN** they can:
-  - Select from available repositories in the project
+  - Select from all user-owned repositories (external repos not tied to any project are shown)
   - Specify the source path (with autocomplete or validation)
   - Specify the target path in the container
   - Optionally select a branch/tag
@@ -128,7 +142,7 @@ The system SHALL include git mounts in the profile preview/resolve output.
   - Source path (with expanded glob matches if applicable)
   - Target path in container
   - Resolved branch name
-  - Clone status (exists, will clone, clone failed)
+  - Clone status (will clone on container creation)
 
 #### Scenario: Preview warns about missing repository
 - **GIVEN** a config profile with a git mount referencing a non-existent repository

openspec/changes/config-profile-git-mounts/tasks.md

@@ -62,3 +62,14 @@
 - [x] 8.1 Update API documentation with new git_mounts fields
 - [x] 8.2 Add user guide section for using git repositories in config profiles
 - [x] 8.3 Document branch pinning behavior and fallback rules
+
+## 9. External Repository Support
+
+- [x] 9.1 Remove project requirement from git mount validation
+- [x] 9.2 Add endpoint to create external repositories (no project_id)
+- [x] 9.3 Update list_repositories endpoint to return all user repos
+- [x] 9.4 Add endpoint to list external repositories
+- [x] 9.5 Update spec: repos can be external (not tied to project)
+- [x] 9.6 Update spec: auto-clone to persistent location on every container creation
+- [x] 9.7 Update spec: pull updates when creating new containers
+- [x] 9.8 Update spec: per-instance isolation (no shared clones)