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further work on results

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Alex Blank
2025-07-29 10:26:45 +00:00
parent 918c7f8fa9
commit d80a3a5374
33 changed files with 31 additions and 23 deletions
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thesis/sections/background.tex
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@@ -29,7 +29,7 @@ This process, known as menstruation, marks the beginning of a new cycle.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.6\textwidth]{background_menstrual_cycle_physiology}
\includegraphics[width=0.6\textwidth]{resources/figures/background/background_menstrual_cycle_physiology}
\caption{Physiological changes during the menstrual cycle~\cite{pedroso_menstrual_2022}.
The figure shows the relationship between hormonal fluctuations, physiological changes, and body temperature, with a clear temperature rise around ovulation.}
@@ -42,7 +42,7 @@ Figure~\ref{fig:background_menstrual_cycle_physiology} provides a detailed overv
\begin{figure}[htbp]
\centering
\includegraphics[width=0.9\textwidth]{background_labeled_cycle}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_labeled_cycle}
\caption{Body core temperature curve across a menstrual cycle. The red line represents a locally smoothed temperature trend.
Menstruation, ovulation, and the fertile phase are indicated in red, blue, and green, respectively.}
\label{fig:background_labeled_cycle}
@@ -59,7 +59,7 @@ Anovulation can have various causes, including hormonal imbalances, stress, or u
\begin{figure}[htbp]
\centering
\includegraphics[width=0.9\textwidth]{background_anovulatory_cycle}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_anovulatory_cycle}
\caption{Example of a cycle without an ovulation and the resulting absence of a temperature rise}
\label{fig:background_anovulation}
\end{figure}
@@ -78,14 +78,14 @@ show examples of cycles that are significantly longer or shorter than a normativ
\begin{figure}[htb]
\centering
\includegraphics[width=0.9\textwidth]{background_long_cycle}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_long_cycle}
\caption{Example of a long cycle with a length of 111 days}
\label{fig:background_long_cycle}
\end{figure}
\begin{figure}[htb]
\centering
\includegraphics[width=0.9\textwidth]{background_short_cycle}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_short_cycle}
\caption{Example of a short cycle with a length of 22 days}
\label{fig:background_short_cycle}
\end{figure}
@@ -104,14 +104,14 @@ can reliably be used as the next.
\begin{figure}[htb]
\centering
\includegraphics[width=0.9\textwidth]{background_irregular_cycle_example}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_irregular_cycle_example}
\caption{Example of a woman with irregular menstrual rhythm}
\label{fig:background_irregular_cycles}
\end{figure}
\begin{figure}[htbp]
\centering
\includegraphics[width=0.9\textwidth]{background_regular_cycle_example}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_regular_cycle_example}
\caption{Example of a woman with regular menstrual rhythm}
\label{fig:background_regular_cycles}
\end{figure}
@@ -126,7 +126,7 @@ as illustrated in Figure~\ref{fig:background_pregnancy_chance}.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.7\textwidth]{background_pregnancy_chance_over_time}
\includegraphics[width=0.7\textwidth]{resources/figures/background/background_pregnancy_chance_over_time}
\caption{Chance of fertilization depending on the day of the menstrual cycle.
The highest chance is around one day before ovulation~\cite{dunson_day-specific_1999}.}
\label{fig:background_pregnancy_chance}
@@ -173,7 +173,7 @@ Therefore, all user-entered cycle starts undergo manual review to reduce annotat
\begin{figure}[htbp]
\centering
\includegraphics[width=0.3\textwidth]{ovularing}
\includegraphics[width=0.3\textwidth]{resources/figures/background/ovularing}
\caption{The OvulaRing sensor attached to its silicone ring~\cite{noauthor_ringpng_nodate}.}
\label{fig:background_ovularing}
\end{figure}
@@ -215,7 +215,7 @@ Distinguishing illness-related changes from cycle-related ones requires models t
\begin{figure}[htbp]
\centering
\includegraphics[width=0.9\textwidth]{background_fever_cycle}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_fever_cycle}
\caption{Example of a cycle affected by illness, showing a fever-induced temperature rise shortly before the expected ovulatory shift.}
\label{fig:background_fever_cycle}
\end{figure}
@@ -228,7 +228,7 @@ Figure~\ref{fig:background_menstruation_data_gap} shows an example cycle with a
\begin{figure}[htbp]
\centering
\includegraphics[width=0.9\textwidth]{background_menstruation_data_gap}
\includegraphics[width=0.9\textwidth]{resources/figures/background/background_menstruation_data_gap}
\caption{Example of a cycle with a data gap at the beginning, caused by sensor removal during menstruation.}
\label{fig:background_menstruation_data_gap}
\end{figure}
@@ -287,7 +287,7 @@ outputs at each time step.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.8\textwidth]{recurrent_neural_network_unfold}
\includegraphics[width=0.8\textwidth]{resources/figures/background/recurrent_neural_network_unfold}
\caption{Schematic diagram of the unfolded structure of a recurrent neural network~\cite{fdeloche_english_2017}}
\label{fig:rnn_unfolded}
\end{figure}
@@ -308,7 +308,7 @@ allowing LSTMs to preserve and update memory over long sequences.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.6\textwidth]{background_lstm_structure}
\includegraphics[width=0.6\textwidth]{resources/figures/background/background_lstm_structure}
\caption{Architecture of a memory cell \( c_j \) and its gate units \( \text{in}_j \) and \( \text{out}_j \).
At the center, the self-recurrent linear unit (with weight 1.0) maintains the internal state~\cite{hochreiter_long_1997}.
See text for more details.}
@@ -376,7 +376,7 @@ linearly projected from the input and used to compute attention scores.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.4\textwidth]{background_transformer_architecture}
\includegraphics[width=0.4\textwidth]{resources/figures/background/background_transformer_architecture}
\caption{The Transformer - architecture for an encoder-decoder model~\cite{vaswani_attention_2017}}
\label{fig:background_transformer_architecture}
\end{figure}
@@ -412,7 +412,7 @@ This was done according to the original paper~\cite{vaswani_attention_2017}.
\begin{figure}[htbp]
\centering
\includegraphics[width=0.8\textwidth]{background_attention_mechanism}
\includegraphics[width=0.8\textwidth]{resources/figures/background/background_attention_mechanism}
\caption{(left) Scaled Dot-Product Attention.
(right) Multi-Head Attention consisting of several attention layers running in parallel~\cite{vaswani_attention_2017}.}
\label{fig:background_attention_mechanism}
@@ -553,7 +553,7 @@ The stride determines how far the filter moves at each step, affecting both the
\begin{figure}[htbp]
\centering
\includegraphics[width=0.6\textwidth]{background_convolution_example}
\includegraphics[width=0.6\textwidth]{resources/figures/background/background_convolution_example}
\caption{Example of a simple 1-D convolution on an input sequence.}
\label{fig:background_convolution_example}
\end{figure}