fix: tunnel URLs, session naming, git control bar placement

- Exclude api.trycloudflare.com from tunnel URL regex (both tunnel.py and
  docker/tunnel.py). Real tunnel subdomains are 10+ random chars.
- Fix missing get_backend_network_name import in services/tunnel.py by
  using hardcoded BACKEND_NETWORK constant.
- Add auto-numbering to session display names: project/repo/tool #N when
  duplicates exist for the same project/repo/tool type.
- Move GitToolbar from full-width workspace header into WorkspaceSidebar
  above the FileBrowser, so git controls appear in the file browser area.
- Remove stale ToolConfig import from instance_lifecycle.py (model was
  removed in earlier dev work); _fetch_tool_configs returns empty defaults.

Quality gates: tsc pass (0 errors), build pass, Python syntax pass
Tests: 127/131 passed (4 pre-existing failures)

apps/api/src/services/docker/tunnel.py

@@ -56,7 +56,9 @@ def start_cloudflared_tunnel(
     )
 
     # Wait for the URL to appear in output
-    url_pattern = re.compile(r"https://[a-z0-9-]+\.trycloudflare\.com")
+    # Exclude api.trycloudflare.com which is the Cloudflare API endpoint,
+    # not a tunnel URL. Real tunnel URLs have random subdomains.
+    url_pattern = re.compile(r"https://(?!api\.)[a-z0-9-]{10,}\.trycloudflare\.com")
     start_time = time.time()
     url = None
 

apps/api/src/services/instance_lifecycle.py

@@ -18,7 +18,7 @@ from src.models.config_folder import ConfigFolder
 from src.models.config_profile import ConfigProfile
 from src.models.git_repository import GitRepository
 from src.models.project import Project
-from src.models.tool_config import ToolConfig
+# ToolConfig model was removed; _fetch_tool_configs returns empty defaults
 from src.models.tool_instance import ToolInstance
 from src.models.tool_type import ToolType
 from src.models.user import User
@@ -52,9 +52,26 @@ async def create_new_instance(
         tool_type, instance_name, instance_dir, repo, user, project.id, tool_port
     )
 
+    # Auto-generate display name with numbering when duplicates exist
+    auto_name = f"{project.name} / {repo.name} / {tool_type.display_name}"
+    if not display_name:
+        result = await session.execute(
+            select(ToolInstance).where(
+                ToolInstance.project_id == project.id,
+                ToolInstance.repository_id == repo.id,
+                ToolInstance.tool_type_id == tool_type.id,
+                ToolInstance.owner_id == user.id,
+            )
+        )
+        existing = result.scalars().all()
+        count = len(existing)
+        if count > 0:
+            auto_name = f"{project.name} / {repo.name} / {tool_type.display_name} #{count + 1}"
+        display_name = auto_name
+
     instance = ToolInstance(
         name=instance_name,
-        display_name=display_name or f"{project.name} / {repo.name} / {tool_type.display_name}",
+        display_name=display_name,
         tool_type_id=tool_type.id,
         repository_id=repo.id,
         project_id=project.id,
@@ -308,45 +325,17 @@ async def _build_or_render_compose(
 
 
 async def _fetch_tool_configs(
-    session: AsyncSession,
-    user_id: Any,
-    tool_type_id: Any,
-    project_id: Any,
+    _session: AsyncSession,
+    _user_id: Any,
+    _tool_type_id: Any,
+    _project_id: Any,
 ) -> tuple[dict, dict, Any, Any, Any, dict, list]:
-    """Fetch tool configs and return parsed values."""
-    env_vars: dict[str, str] = {}
-    config_files: dict[str, str] = {}
-    port_override = None
-    start_command = None
-    working_directory = None
-    extra_env_vars: dict[str, str] = {}
-    extra_volumes: list[dict] = []
+    """Fetch tool configs and return parsed values.
 
-    query = (
-        select(ToolConfig)
-        .where(ToolConfig.user_id == user_id, ToolConfig.tool_type_id == tool_type_id)
-        .where((ToolConfig.project_id == project_id) | (ToolConfig.project_id.is_(None)))
-    )
-    configs = (await session.execute(query)).scalars().all()
-
-    for cfg in configs:
-        if cfg.config_type == "env":
-            env_vars[cfg.key] = cfg.value
-        elif cfg.config_type == "file" and cfg.file_path:
-            config_files[cfg.file_path] = cfg.value
-        if cfg.port_override:
-            port_override = cfg.port_override
-        if cfg.start_command:
-            start_command = cfg.start_command
-        if cfg.working_directory:
-            working_directory = cfg.working_directory
-        if cfg.environment_variables:
-            extra_env_vars.update(cfg.environment_variables)
-        if cfg.volumes:
-            extra_volumes.extend(cfg.volumes)
-
-    env_vars.update(extra_env_vars)
-    return env_vars, config_files, port_override, start_command, working_directory, extra_env_vars, extra_volumes
+    ToolConfig model was removed from the codebase; this now returns
+    empty defaults so the lifecycle code continues to compile.
+    """
+    return {}, {}, None, None, None, {}, []
 
 
 async def _stage_configs_and_folders(

apps/api/src/services/tunnel.py

@@ -12,10 +12,10 @@ import re
 import subprocess
 from typing import Any
 
-from src.services.docker import get_backend_network_name
-
 logger = logging.getLogger(__name__)
 
+BACKEND_NETWORK = "backend"
+
 TUNNEL_IMAGE = "cloudflare/cloudflared:latest"
 
 
@@ -112,7 +112,7 @@ def start_tunnel(
         "run",
         "-d",
         "--network",
-        get_backend_network_name(),
+        BACKEND_NETWORK,
         "--name",
         tunnel_name,
         TUNNEL_IMAGE,
@@ -133,7 +133,9 @@ def start_tunnel(
     logger.debug("Tunnel container started: %s", container_id)
 
     # Wait for URL to appear in logs
-    url_pattern = re.compile(r"https://[a-z0-9-]+\.trycloudflare\.com")
+    # Exclude api.trycloudflare.com which is the Cloudflare API endpoint,
+    # not a tunnel URL. Real tunnel URLs have random subdomains (10+ chars).
+    url_pattern = re.compile(r"https://(?!api\.)[a-z0-9-]{10,}\.trycloudflare\.com")
     start_time = __import__("time").time()
     url: str | None = None
     combined_logs = ""

apps/web/src/components/features/git/WorkspaceSidebar.tsx

@@ -4,6 +4,7 @@ import type { ToolType } from "../../../types/tool-type";
 import { FileBrowser } from "./FileBrowser";
 import { CommitPanel } from "../git/CommitPanel";
 import { InstanceList } from "../session/InstanceList";
+import { GitToolbar } from "./GitToolbar";
 
 interface WorkspaceSidebarProps {
 	projectId: string;
@@ -11,7 +12,12 @@ interface WorkspaceSidebarProps {
 	repositories: GitRepository[];
 	gitStatus: GitStatus | null;
 	toolTypes: ToolType[];
+	currentBranch: string;
+	branches: string[];
+	hasRemote: boolean;
 	onRepoChange: (repoId: string) => void;
+	onBranchChange: (branch: string) => void;
+	onRefresh: () => void;
 	onCommit: () => void;
 }
 
@@ -21,11 +27,25 @@ export const WorkspaceSidebar = ({
 	repositories,
 	gitStatus,
 	toolTypes,
+	currentBranch,
+	branches,
+	hasRemote,
 	onRepoChange,
+	onBranchChange,
+	onRefresh,
 	onCommit,
 }: WorkspaceSidebarProps) => {
 	return (
 		<aside className="workspace-sidebar">
+			<GitToolbar
+				projectId={projectId}
+				repoId={repoId}
+				currentBranch={currentBranch}
+				branches={branches}
+				hasRemote={hasRemote}
+				onBranchChange={onBranchChange}
+				onRefresh={onRefresh}
+			/>
 			<div className="sidebar-section">
 				<label className="form-field">
 					Repository

apps/web/src/pages/RepoWorkspacePage.tsx

@@ -12,7 +12,6 @@ import {
 import { WorkspaceSidebar } from "../components/features/git";
 import { FileEditor } from "../components/features/git/FileEditor";
 import { WorkspaceHeader } from "../components/features/workspace/WorkspaceHeader";
-import { GitToolbar } from "../components/features/git/GitToolbar";
 import { LoadingState, ErrorState } from "../components/ui";
 import { listToolTypes } from "../api/tool-types";
 
@@ -161,26 +160,6 @@ export const RepoWorkspace = () => {
 
 			{status === "ready" && repositories.length > 0 && (
 				<>
-					{selectedRepoId && (
-						<GitToolbar
-							projectId={projectId!}
-							repoId={selectedRepoId}
-							currentBranch={currentBranch}
-							branches={branches}
-							hasRemote={Boolean(selectedRepo?.remote_url)}
-							onBranchChange={(branch) => {
-								setCurrentBranch(branch);
-								const newParams = new URLSearchParams(searchParams);
-								newParams.set("branch", branch);
-								setSearchParams(newParams);
-							}}
-							onRefresh={() => {
-								void loadBranches();
-								void loadGitStatus();
-								window.dispatchEvent(new CustomEvent("refresh-file-tree"));
-							}}
-						/>
-					)}
 					<div className="workspace-layout">
 						{selectedRepoId && (
 							<WorkspaceSidebar
@@ -189,7 +168,21 @@ export const RepoWorkspace = () => {
 								repositories={repositories}
 								gitStatus={gitStatus}
 								toolTypes={toolTypes}
+								currentBranch={currentBranch}
+								branches={branches}
+								hasRemote={Boolean(selectedRepo?.remote_url)}
 								onRepoChange={handleRepoChange}
+								onBranchChange={(branch) => {
+									setCurrentBranch(branch);
+									const newParams = new URLSearchParams(searchParams);
+									newParams.set("branch", branch);
+									setSearchParams(newParams);
+								}}
+								onRefresh={() => {
+									void loadBranches();
+									void loadGitStatus();
+									window.dispatchEvent(new CustomEvent("refresh-file-tree"));
+								}}
 								onCommit={() => {
 									void loadGitStatus();
 									window.dispatchEvent(new CustomEvent("refresh-file-tree"));