Compare commits

..

2 Commits

Author SHA1 Message Date
alex 22c035984e feat: add config profiles data model and migrations
- Add ConfigProfile model with user ownership, name, description
- Add ConfigInclude model for ordered profile self-references
- Add ConfigMount model for mount/file definitions
- Add selected_profile_id to ToolInstance for per-instance profile selection
- Add default profile properties to UserConfig JSONB config
- Create Alembic migration 0013 for new tables and columns
- Register new models in models/__init__.py
- Mark config_folders.is_active as deprecated
- Add migration metadata test

Quality gates: syntax check passed (all files parse successfully)
OpenSpec: add-config-profiles task 1.1
2026-05-24 12:54:45 +00:00
alex d35037df01 docs: add OpenSpec status review and update add-config-profiles tasks
- Create comprehensive OpenSpec status and implementation checklist review
- Document current state: 11 active changes, 66/345 tasks complete (19.1%)
- Update add-config-profiles/tasks.md to reflect completed model work
- Identify near-completion changes, blockers, and recommendations

Quality gates: review document only, no code changes
2026-05-24 12:54:23 +00:00
1355 changed files with 16946 additions and 88488 deletions
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{
"fingerprint": "639c16d45210921c3c8ece071ef18bbe0c426ea2"
}
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# Skill Registry — workspace
<!-- Auto-generated by gentle-pi extensions/skill-registry.ts. Run /skill-registry:refresh to regenerate. -->
Last updated: 2026-06-05
## Sources scanned
- .opencode/skills
- .claude/skills
## Contract
**Delegator use only.** This registry is an index, not a summary. Any agent that launches subagents reads it to select relevant skills, then passes exact `SKILL.md` paths for the subagent to read before work.
`SKILL.md` remains the source of truth. Do not inject generated summaries or compact rules by default; pass paths so subagents load the full runtime contract and preserve author intent.
## Skills
| Skill | Trigger / description | Scope | Path |
| --- | --- | --- | --- |
| `openspec-apply-change` | Implement tasks from an OpenSpec change. Use when the user wants to start implementing, continue implementation, or work through tasks. | project | `/workspace/.opencode/skills/openspec-apply-change/SKILL.md` |
| `openspec-archive-change` | Archive a completed change in the experimental workflow. Use when the user wants to finalize and archive a change after implementation is complete. | project | `/workspace/.opencode/skills/openspec-archive-change/SKILL.md` |
| `openspec-explore` | Enter explore mode - a thinking partner for exploring ideas, investigating problems, and clarifying requirements. Use when the user wants to think through something before or during a change. | project | `/workspace/.opencode/skills/openspec-explore/SKILL.md` |
| `openspec-propose` | Propose a new change with all artifacts generated in one step. Use when the user wants to quickly describe what they want to build and get a complete proposal with design, specs, and tasks ready for implementation. | project | `/workspace/.opencode/skills/openspec-propose/SKILL.md` |
| `sift-backlog` | Triage and organize backlog tasks into actionable plans. Use when asked to review the backlog, prioritize tasks, create plans from backlog items, or move tasks from backlog to open status. Handles the full workflow of listing backlog tasks, grouping related tasks into plans, setting priorities and dependencies, activating plans, and changing task status from backlog to open. | project | `/workspace/.claude/skills/sift-backlog/SKILL.md` |
## Loading protocol
1. Match task context and target files against the `Trigger / description` column.
2. Pass only the matching `Path` values to the subagent under `## Skills to load before work`.
3. Instruct the subagent to read those exact `SKILL.md` files before reading, writing, reviewing, testing, or creating artifacts.
4. If no matching skill exists, proceed without project skill injection and report `skill_resolution: none`.
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# .claude (index)
dir: .claude
## role
Configuration directory for Claude AI assistant integration and custom instructions.
## parent
index: ./.pi-map.index.md
map: ./.pi-map.md
## children
- .claude/skills
index: .claude/skills/.pi-map.index.md
map: .claude/skills/.pi-map.md
## files
## links
index: .claude/.pi-map.index.md
map: .claude/.pi-map.md
## workflows
-
## dirty
-
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# .claude
dir: .claude
index: .claude/.pi-map.index.md
## role
Configuration directory for Claude AI assistant integration and custom instructions.
## files
## arch
Project-specific AI tooling configuration using convention-based file organization for assistant context and behavior customization.
## tags
-
## symbols
-
## workflows
-
## dirty
-
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# .claude/skills (index)
dir: .claude/skills
## role
Contains reusable AI skill definitions and prompt templates that configure Claude's specialized capabilities for specific development tasks.
## parent
index: .claude/.pi-map.index.md
map: .claude/.pi-map.md
## children
- .claude/skills/sift-backlog
index: .claude/skills/sift-backlog/.pi-map.index.md
map: .claude/skills/sift-backlog/.pi-map.md
## files
## links
index: .claude/skills/.pi-map.index.md
map: .claude/skills/.pi-map.md
## workflows
-
## dirty
-
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# .claude/skills
dir: .claude/skills
index: .claude/skills/.pi-map.index.md
## role
Contains reusable AI skill definitions and prompt templates that configure Claude's specialized capabilities for specific development tasks.
## files
## arch
Modular skill-based architecture using declarative configuration files (likely YAML/JSON) to define context-specific behaviors, tool access patterns, and system prompts for different operational modes.
## tags
-
## symbols
-
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .claude/skills/sift-backlog (index)
dir: .claude/skills/sift-backlog
## role
Defines a workflow skill for triaging, organizing, and activating backlog tasks into actionable plans using a custom CLI tool.
## parent
index: .claude/skills/.pi-map.index.md
map: .claude/skills/.pi-map.md
## children
-
## files
- SKILL.md
## links
index: .claude/skills/sift-backlog/.pi-map.index.md
map: .claude/skills/sift-backlog/.pi-map.md
## workflows
-
## dirty
-
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# .claude/skills/sift-backlog
dir: .claude/skills/sift-backlog
index: .claude/skills/sift-backlog/.pi-map.index.md
## role
Defines a workflow skill for triaging, organizing, and activating backlog tasks into actionable plans using a custom CLI tool.
## files
- SKILL.md | Defines a workflow skill for triaging, organizing, and activating backlog tasks into actionable plans using a custom CLI tool. | dep: sf (custom CLI tool), task management system, plan management system
## arch
Documentation-driven skill definition using structured markdown with command specifications, workflow stages, and integration patterns for Claude CLI tooling.
## tags
skill, defines, workflow, triaging, organizing, activating, backlog, tasks
## symbols
-
## workflows
-
## dirty
-
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---
name: sift-backlog
description: Triage and organize backlog tasks into actionable plans. Use when asked to review the backlog, prioritize tasks, create plans from backlog items, or move tasks from backlog to open status. Handles the full workflow of listing backlog tasks, grouping related tasks into plans, setting priorities and dependencies, activating plans, and changing task status from backlog to open.
---
# Sift Backlog
Triage backlog tasks: prioritize, group into plans, set dependencies, and activate.
## Overview
1. List backlog tasks (`sf task backlog`)
2. Clarify and enrich each task (titles, descriptions)
3. Identify groupings and create draft plans
4. Add tasks to plans and set dependencies
5. Activate plans
6. Set task status to open
## Workflow
### Step 1: List Backlog Tasks
```bash
sf task backlog
```
### Step 2: Clarify and Enrich Tasks
Backlog tasks often have only a brief title with no description. Before organizing, ensure each task is well-defined.
**For each task, evaluate:**
- Is the title clear and actionable?
- Is there a description? Check with `sf task describe <task-id> --show`
- Is the scope unambiguous?
**If the title is unclear**, update it:
```bash
sf update <task-id> --title "Clear, actionable title"
```
**Add a description** with context, scope, and acceptance criteria:
```bash
sf task describe <task-id> --content "Description with:
- What needs to be done
- Why it matters
- Acceptance criteria
- Any relevant context"
```
**Use your best judgment** to interpret tasks and make reasonable decisions about scope, grouping, and priority. You have context about the codebase, project patterns, and typical development practices—leverage this knowledge rather than deferring to the user for routine decisions.
**Only ask the user for clarity when absolutely necessary:**
- The task is fundamentally ambiguous (multiple mutually exclusive interpretations)
- Critical business logic or user-facing behavior that could go wrong in meaningful ways
- External dependencies or integrations you cannot verify
**Do NOT ask about:**
- Implementation details you can reasonably infer
- Priority or grouping decisions—use your judgment
- Standard development practices (testing, code style, etc.)
- Tasks where a reasonable interpretation exists
### Step 3: Create Draft Plans
Group related tasks into plans using your best judgment. Plans start as drafts (tasks won't be dispatched until activated).
**Grouping guidance:**
- Group tasks that share a common theme, feature area, or goal
- Consider technical dependencies when grouping (tasks that touch the same files/modules)
- Separate unrelated work into distinct plans for parallel execution
- Don't over-group—if tasks are truly independent, separate plans enable better parallelism
- Don't under-group—related tasks benefit from shared context and coordinated execution
```bash
sf plan create --title "Plan Name"
```
**Example:**
```bash
sf plan create --title "Authentication Improvements"
# Output: Created plan el-abc123
```
### Step 4: Add Tasks to Plans
```bash
sf plan add-task <plan-id> <task-id>
```
**Example:**
```bash
sf plan add-task el-abc123 el-task1
sf plan add-task el-abc123 el-task2
```
### Step 5: Set Dependencies Between Tasks
Use `blocks` dependency when one task must complete before another can start.
```bash
sf dependency add <blocked-id> <blocker-id> --type blocks
```
**Semantics:** The first ID is blocked BY the second ID. The blocker must complete first.
**Example:** Task 2 can't start until Task 1 completes:
```bash
sf dependency add el-task2 el-task1 --type blocks
```
### Step 6: Update Priorities
Set priorities based on your assessment of impact, urgency, and dependencies. Use your judgment—you don't need user confirmation for routine prioritization.
**Priority guidance:**
- **Critical (1):** Blocking issues, security vulnerabilities, production bugs
- **High (2):** Important features with deadlines, significant user impact
- **Medium (3):** Standard feature work, most tasks default here
- **Low (4):** Nice-to-haves, minor improvements, tech debt
- **Minimal (5):** Backlog cleanup, documentation, exploratory work
```bash
sf update <task-id> --priority <1-5>
```
| Value | Level |
| ----- | -------- |
| 1 | Critical |
| 2 | High |
| 3 | Medium |
| 4 | Low |
| 5 | Minimal |
### Step 7: Activate Plans
Once tasks are organized with dependencies set, activate plans to enable dispatch.
```bash
sf plan activate <plan-id>
```
### Step 8: Set Task Status to Open
Move tasks from backlog to open so they become ready for work.
```bash
sf update <id> --status open
```
## Other Actions
**Close obsolete tasks:**
```bash
sf task close <id> --reason "Won't do: <reason>"
```
**Defer tasks:**
```bash
sf task defer <id> --until <date>
```
**View existing plans:**
```bash
sf plan list
```
**View tasks in a plan:**
```bash
sf plan tasks <plan-id>
```
## Tips
- **Use your best judgment** for grouping, prioritization, and task interpretation—don't defer routine decisions to the user
- **Only escalate to the user** when ambiguity is fundamental and could lead to wasted work (mutually exclusive interpretations, critical business decisions)
- Make reasonable inferences about implementation details, scope, and priority based on codebase context
- Create plans before setting dependencies to avoid dispatch race conditions
- Always activate plans after dependencies are set
- Focus on oldest backlog items first (sorted by creation date)
- Every task should have a clear title and description before activation
- When uncertain about a minor detail, make a reasonable choice and document it in the task description—workers can ask if needed
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*.so
.python-version
.venv/
.venv-test/
venv/
env/
.pytest_cache/
@@ -49,12 +48,3 @@ apps/web/dist/
# OS
.DS_Store
Thumbs.db
/.stoneforge/.worktrees/
# Pi / agent cache
.pi/
.atl/
.sisyphus/
.pi-lens/
minerv3/
.cache/
openspec-audit-report.md
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# .opencode (index)
dir: .opencode
## role
Hidden directory for OpenCode IDE/editor configuration and workspace metadata
## parent
index: ./.pi-map.index.md
map: ./.pi-map.md
## children
- .opencode/commands
index: .opencode/commands/.pi-map.index.md
map: .opencode/commands/.pi-map.md
- .opencode/skills
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## files
## links
index: .opencode/.pi-map.index.md
map: .opencode/.pi-map.md
## workflows
-
## dirty
-
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# .opencode
dir: .opencode
index: .opencode/.pi-map.index.md
## role
Hidden directory for OpenCode IDE/editor configuration and workspace metadata
## files
## arch
IDE-specific dot-directory pattern, no active code architecture; stores tool preferences and ephemeral state
## tags
-
## symbols
-
## workflows
-
## dirty
-
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# .opencode/commands (index)
dir: .opencode/commands
## role
Defines experimental workflow skills and AI assistant stances for an OpenSpec-based development system with structured change management.
## parent
index: .opencode/.pi-map.index.md
map: .opencode/.pi-map.md
## children
-
## files
- opsx-apply.md
- opsx-archive.md
- opsx-explore.md
- opsx-propose.md
## links
index: .opencode/commands/.pi-map.index.md
map: .opencode/commands/.pi-map.md
## workflows
-
## dirty
-
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# .opencode/commands
dir: .opencode/commands
index: .opencode/commands/.pi-map.index.md
## role
Defines experimental workflow skills and AI assistant stances for an OpenSpec-based development system with structured change management.
## files
- opsx-apply.md | Defines an experimental workflow skill for implementing tasks from an OpenSpec change through a structured, interactive process with CLI integration and progress tracking. | dep: openspec CLI, AskUserQuestion tool, filesystem (for reading context files)
- opsx-archive.md | Defines a workflow for archiving completed changes in an experimental openspec-based development system | dep: openspec CLI, AskUserQuestion tool, Task tool, Skill tool, filesystem (mkdir, mv), JSON parsing
- opsx-explore.md | Defines the "explore mode" stance for an AI assistant - a thinking/discovery mode for investigating problems and clarifying requirements without implementing code | dep: OpenSpec system
- opsx-propose.md | Defines a workflow for proposing new changes in the openspec system by creating a change directory and generating all required artifacts (proposal.md, design.md, tasks.md) in dependency order | dep: openspec CLI, AskUserQuestion tool, TodoWrite tool, JSON parsing
## arch
Markdown-based command definitions using a workflow pattern with interactive CLI integration, progress tracking, and dependency-ordered artifact generation across explore/propose/apply/archive lifecycle phases.
## tags
opsx, defines, workflow, openspec, openspec cli, askuserquestion tool, explore, experimental
## symbols
-
## workflows
-
## dirty
-
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# .opencode/skills (index)
dir: .opencode/skills
## role
Contains reusable AI skill modules that provide specialized capabilities for the OpenCode assistant.
## parent
index: .opencode/.pi-map.index.md
map: .opencode/.pi-map.md
## children
- .opencode/skills/openspec-apply-change
index: .opencode/skills/openspec-apply-change/.pi-map.index.md
map: .opencode/skills/openspec-apply-change/.pi-map.md
- .opencode/skills/openspec-archive-change
index: .opencode/skills/openspec-archive-change/.pi-map.index.md
map: .opencode/skills/openspec-archive-change/.pi-map.md
- .opencode/skills/openspec-explore
index: .opencode/skills/openspec-explore/.pi-map.index.md
map: .opencode/skills/openspec-explore/.pi-map.md
- .opencode/skills/openspec-propose
index: .opencode/skills/openspec-propose/.pi-map.index.md
map: .opencode/skills/openspec-propose/.pi-map.md
## files
## links
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## workflows
-
## dirty
-
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# .opencode/skills
dir: .opencode/skills
index: .opencode/skills/.pi-map.index.md
## role
Contains reusable AI skill modules that provide specialized capabilities for the OpenCode assistant.
## files
## arch
Modular plugin-based architecture where each skill is a self-contained module with defined interfaces, enabling dynamic loading and composition of AI capabilities.
## tags
-
## symbols
-
## workflows
-
## dirty
-
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# .opencode/skills/openspec-apply-change (index)
dir: .opencode/skills/openspec-apply-change
## role
Defines an AI assistant skill that implements OpenSpec changes through a spec-driven workflow with structured planning, validation, and execution phases.
## parent
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## children
-
## files
- SKILL.md
## links
index: .opencode/skills/openspec-apply-change/.pi-map.index.md
map: .opencode/skills/openspec-apply-change/.pi-map.md
## workflows
-
## dirty
-
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# .opencode/skills/openspec-apply-change
dir: .opencode/skills/openspec-apply-change
index: .opencode/skills/openspec-apply-change/.pi-map.index.md
## role
Defines an AI assistant skill that implements OpenSpec changes through a spec-driven workflow with structured planning, validation, and execution phases.
## files
- SKILL.md | Defines an AI assistant skill for implementing tasks from an OpenSpec change using a spec-driven workflow | dep: openspec CLI, AskUserQuestion tool, filesystem access
## arch
Template-based skill definition using markdown documentation with structured workflow phases (planning, validation, execution) and integration points for external tools (OpenSpec CLI, OpenCode agent).
## tags
skill, defines, assistant, implementing, tasks, openspec, change, spec
## symbols
-
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .opencode/skills/openspec-archive-change (index)
dir: .opencode/skills/openspec-archive-change
## role
Provides a reusable automation skill for archiving completed experimental changes via the openspec CLI
## parent
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## children
-
## files
- SKILL.md
## links
index: .opencode/skills/openspec-archive-change/.pi-map.index.md
map: .opencode/skills/openspec-archive-change/.pi-map.md
## workflows
-
## dirty
-
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# .opencode/skills/openspec-archive-change
dir: .opencode/skills/openspec-archive-change
index: .opencode/skills/openspec-archive-change/.pi-map.index.md
## role
Provides a reusable automation skill for archiving completed experimental changes via the openspec CLI
## files
- SKILL.md | Defines a skill for archiving completed changes in an experimental workflow using the openspec CLI. | dep: openspec CLI, AskUserQuestion tool, Task tool, file system (mkdir, mv, read), JSON parsing
## arch
Skill-based modular automation pattern using markdown-defined CLI operations with structured metadata and command templates
## tags
skill, defines, archiving, completed, changes, experimental, workflow, openspec
## symbols
-
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .opencode/skills/openspec-explore (index)
dir: .opencode/skills/openspec-explore
## role
Defines a conversational AI skill/persona for "explore mode" that serves as a thinking partner for exploring ideas, investigating problems, and clarifying requirements without implementing code.
## parent
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## children
-
## files
- SKILL.md
## links
index: .opencode/skills/openspec-explore/.pi-map.index.md
map: .opencode/skills/openspec-explore/.pi-map.md
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .opencode/skills/openspec-explore
dir: .opencode/skills/openspec-explore
index: .opencode/skills/openspec-explore/.pi-map.index.md
## role
Defines a conversational AI skill/persona for "explore mode" that serves as a thinking partner for exploring ideas, investigating problems, and clarifying requirements without implementing code.
## files
- SKILL.md | Defines a conversational AI skill/persona for "explore mode" - a thinking partner for exploring ideas, investigating problems, and clarifying requirements without implementing code. | dep: openspec CLI
## arch
Single-file skill definition using markdown-based persona specification with structured sections for description, usage guidelines, and behavioral constraints.
## tags
skill, defines, conversational, persona, explore, mode, thinking, partner
## symbols
-
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .opencode/skills/openspec-propose (index)
dir: .opencode/skills/openspec-propose
## role
Provides a structured workflow skill for proposing new changes using the openspec CLI with artifact generation in dependency order.
## parent
index: .opencode/skills/.pi-map.index.md
map: .opencode/skills/.pi-map.md
## children
-
## files
- SKILL.md
## links
index: .opencode/skills/openspec-propose/.pi-map.index.md
map: .opencode/skills/openspec-propose/.pi-map.md
## workflows
-
## dirty
-
@@ -1,19 +0,0 @@
# .opencode/skills/openspec-propose
dir: .opencode/skills/openspec-propose
index: .opencode/skills/openspec-propose/.pi-map.index.md
## role
Provides a structured workflow skill for proposing new changes using the openspec CLI with artifact generation in dependency order.
## files
- SKILL.md | Defines a structured workflow for proposing new changes using the openspec CLI, generating proposal, design, and task artifacts in dependency order. | dep: openspec CLI, AskUserQuestion tool, TodoWrite tool
## arch
Template-based skill definition using markdown documentation with sequential artifact generation (proposal → design → tasks) following dependency ordering.
## tags
skill, defines, structured, workflow, proposing, new, changes, openspec
## symbols
-
## workflows
-
## dirty
-
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# . (index)
dir: .
## Project Map Protocol
1. Read this protocol and the root `.pi-map.index.md` first.
2. Use `index:` / `map:` references to open relevant directory indexes and maps.
3. Load indexes before rich maps during task-start navigation.
4. Read the local rich map and actual source before editing.
5. Treat non-empty `## dirty` sections in either artifact as stale.
6. If source and generated artifacts disagree, trust source.
7. If map and index disagree, trust neither blindly; verify from source and regenerate the pair.
8. After editing source, run `project_map_patch` for each changed file.
9. Before broad architectural claims or final handoff, run `project_map_validate` when freshness matters.
Trust boundary: index routes, map orients, source decides.
## role
Infrastructure and deployment configuration package for a self-hosted project management platform with OAuth2 authentication, providing containerized orchestration, environment templates, and development tooling.
## parent
-
## children
- .atl
index: .atl/.pi-map.index.md
map: .atl/.pi-map.md
- .claude
index: .claude/.pi-map.index.md
map: .claude/.pi-map.md
- .opencode
index: .opencode/.pi-map.index.md
map: .opencode/.pi-map.md
- .pi
index: .pi/.pi-map.index.md
map: .pi/.pi-map.md
- .sisyphus
index: .sisyphus/.pi-map.index.md
map: .sisyphus/.pi-map.md
- .stoneforge
index: .stoneforge/.pi-map.index.md
map: .stoneforge/.pi-map.md
- apps
index: apps/.pi-map.index.md
map: apps/.pi-map.md
- docs
index: docs/.pi-map.index.md
map: docs/.pi-map.md
- e2e
index: e2e/.pi-map.index.md
map: e2e/.pi-map.md
- minerv3
index: minerv3/.pi-map.index.md
map: minerv3/.pi-map.md
- openspec
index: openspec/.pi-map.index.md
map: openspec/.pi-map.md
- scripts
index: scripts/.pi-map.index.md
map: scripts/.pi-map.md
- tool-images
index: tool-images/.pi-map.index.md
map: tool-images/.pi-map.md
- uploads
index: uploads/.pi-map.index.md
map: uploads/.pi-map.md
## files
- .env.example
- .gitignore
- AGENTS.md
- CHANGELOG.md
- Makefile
- README.md
- docker-compose.traefik.yml
- docker-compose.yml
- progress.md
- swap-pane
## links
index: ./.pi-map.index.md
map: ./.pi-map.md
## workflows
-
## dirty
-
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# .
dir: .
index: ./.pi-map.index.md
## Project Map Protocol
1. Read this protocol and the root `.pi-map.index.md` first.
2. Use `index:` / `map:` references to open relevant directory indexes and maps.
3. Load indexes before rich maps during task-start navigation.
4. Read the local rich map and actual source before editing.
5. Treat non-empty `## dirty` sections in either artifact as stale.
6. If source and generated artifacts disagree, trust source.
7. If map and index disagree, trust neither blindly; verify from source and regenerate the pair.
8. After editing source, run `project_map_patch` for each changed file.
9. Before broad architectural claims or final handoff, run `project_map_validate` when freshness matters.
Trust boundary: index routes, map orients, source decides.
## role
Infrastructure and deployment configuration package for a self-hosted project management platform with OAuth2 authentication, providing containerized orchestration, environment templates, and development tooling.
## files
- .env.example | Provides a template of environment variables for configuring a Headquarter application with PostgreSQL, Redis, Authentik SSO, and Docker/Traefik deployment
- .gitignore | Specifies files and directories for Git to ignore across a multi-language project with Python, Node, and custom tooling | dep: Git
- AGENTS.md | Defines operational rules, workflows, and constraints for AI agents working within an OpenSpec-driven software development project. | dep: OpenSpec, superpowers, git, docker compose, conventional commits
- CHANGELOG.md | Documents version history and notable changes for a Git-based project management web application
- Makefile | Provides standard development commands for containerized web application lifecycle management via Docker Compose | dep: docker compose, alembic, pytest, ruff, mypy, playwright, npm, postgres, redis
- README.md | A self-hosted platform for managing projects, git repositories, and development tools with OAuth2 authentication. | dep: FastAPI, SQLAlchemy, Pydantic, Alembic, python-jose, React, TypeScript, Vite, React Router, Docker, PostgreSQL, Traefik, Authentik, Git
- docker-compose.traefik.yml | Deploys a multi-service web application (frontend, API, PostgreSQL, Redis) behind an existing Traefik reverse proxy with TLS termination and environment-configurable domains. | dep: docker, traefik, postgres, redis, authentik, docker-compose
- docker-compose.yml | Defines a multi-service Docker Compose stack with PostgreSQL, Redis, API backend, and web frontend services for a "headquarter" application | dep: Docker, PostgreSQL, Redis, Vite, asyncpg, nginx
- progress.md | Tracks completed and remaining tasks for a backend-frontend code refactoring project organized in 7 phases
- swap-pane | Empty file with no functionality
## arch
Docker Compose-based microservices architecture with frontend/backend separation, PostgreSQL/Redis data layer, Traefik reverse proxy integration, and environment-driven configuration management following twelve-factor app principles.
## tags
docker, redis, git, application, postgresql, compose, traefik, project
## symbols
-
## workflows
-
## dirty
-
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{}
@@ -1,10 +0,0 @@
{
"sessionID": "ses_1da2608b1ffergOzow3NQt1mGr",
"updatedAt": "2026-05-15T23:50:42.832Z",
"sources": {
"background-task": {
"state": "idle",
"updatedAt": "2026-05-15T23:50:42.832Z"
}
}
}
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262629
1779624255076
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# Runtime data
*.db
*.db-journal
*.db-wal
*.db-shm
daemon-state.json
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# .stoneforge (index)
dir: .stoneforge
## role
Internal configuration and state tracking directory for the Stoneforge application
## parent
index: ./.pi-map.index.md
map: ./.pi-map.md
## children
- .stoneforge/sync
index: .stoneforge/sync/.pi-map.index.md
map: .stoneforge/sync/.pi-map.md
## files
- .dashboard-opened
- .gitignore
- config.yaml
## links
index: .stoneforge/.pi-map.index.md
map: .stoneforge/.pi-map.md
## workflows
-
## dirty
-
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@@ -1,21 +0,0 @@
# .stoneforge
dir: .stoneforge
index: .stoneforge/.pi-map.index.md
## role
Internal configuration and state tracking directory for the Stoneforge application
## files
- .dashboard-opened | Stores timestamp and identifier data for tracking when a dashboard was opened
- .gitignore | Specifies files and patterns for Git to ignore in version control
- config.yaml | Configuration file for the Stoneforge application defining database, sync, playbook, identity, merge, workflow, and agent settings.
## arch
Simple dot-directory pattern storing metadata (.dashboard-opened), version control exclusions (.gitignore), and hierarchical YAML configuration (config.yaml) with domain-separated settings
## tags
config, stores, timestamp, identifier, data, tracking, dashboard, was
## symbols
-
## workflows
-
## dirty
-
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@@ -1,20 +0,0 @@
# Stoneforge Configuration
database: stoneforge.db
sync:
auto_export: true
elements_file: elements.jsonl
dependencies_file: dependencies.jsonl
playbooks:
paths:
- playbooks
identity:
mode: soft
merge:
auto_merge: true
target_branch: null
require_approval: false
workflow:
preset: auto
agents:
permission_model: unrestricted
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@@ -1,20 +0,0 @@
# .stoneforge/sync (index)
dir: .stoneforge/sync
## role
Persists distributed task execution state by storing dependency graphs and ephemeral worker agent records for a collaborative workflow system.
## parent
index: .stoneforge/.pi-map.index.md
map: .stoneforge/.pi-map.md
## children
-
## files
- dependencies.jsonl
- elements.jsonl
## links
index: .stoneforge/sync/.pi-map.index.md
map: .stoneforge/sync/.pi-map.md
## workflows
-
## dirty
-
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# .stoneforge/sync
dir: .stoneforge/sync
index: .stoneforge/sync/.pi-map.index.md
## role
Persists distributed task execution state by storing dependency graphs and ephemeral worker agent records for a collaborative workflow system.
## files
- dependencies.jsonl | Stores a sequence of dependency relationships between entities in JSON Lines format, tracking parent-child, blocking, and reply relationships with timestamps and creators.
- elements.jsonl | Stores JSONL records of ephemeral worker agents with their session history, worktree assignments, and lifecycle metadata for a distributed task execution system.
## arch
Event-sourced JSONL append-only logs with entity-relationship modeling (parent-child, blocking, reply) and session-based worker lifecycle tracking.
## tags
stores, relationships, dependencies, elements, sequence, dependency, entities, json
## symbols
-
## workflows
-
## dirty
-
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@@ -1,43 +0,0 @@
{"blockedId":"el-1of","blockerId":"el-258","type":"parent-child","createdAt":"2026-05-24T09:44:58.759Z","createdBy":"el-2jua"}
{"blockedId":"el-5fe","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:40.892Z","createdBy":"el-2jua"}
{"blockedId":"el-1nj","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.010Z","createdBy":"el-2jua"}
{"blockedId":"el-1bn","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.127Z","createdBy":"el-2jua"}
{"blockedId":"el-4hr","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.244Z","createdBy":"el-2jua"}
{"blockedId":"el-62c","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.372Z","createdBy":"el-2jua"}
{"blockedId":"el-5z8","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.490Z","createdBy":"el-2jua"}
{"blockedId":"el-1t7","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.607Z","createdBy":"el-2jua"}
{"blockedId":"el-5j5","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.726Z","createdBy":"el-2jua"}
{"blockedId":"el-2xl","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.844Z","createdBy":"el-2jua"}
{"blockedId":"el-4bc","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:41.959Z","createdBy":"el-2jua"}
{"blockedId":"el-107","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:42.074Z","createdBy":"el-2jua"}
{"blockedId":"el-32e","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:42.195Z","createdBy":"el-2jua"}
{"blockedId":"el-3ou","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:42.311Z","createdBy":"el-2jua"}
{"blockedId":"el-14w","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:42.425Z","createdBy":"el-2jua"}
{"blockedId":"el-1ou","blockerId":"el-20no","type":"parent-child","createdAt":"2026-05-24T12:44:42.541Z","createdBy":"el-2jua"}
{"blockedId":"el-1nj","blockerId":"el-5fe","type":"blocks","createdAt":"2026-05-24T12:44:42.651Z","createdBy":"el-2jua"}
{"blockedId":"el-1bn","blockerId":"el-5fe","type":"blocks","createdAt":"2026-05-24T12:44:42.761Z","createdBy":"el-2jua"}
{"blockedId":"el-4hr","blockerId":"el-5fe","type":"blocks","createdAt":"2026-05-24T12:44:42.868Z","createdBy":"el-2jua"}
{"blockedId":"el-62c","blockerId":"el-1nj","type":"blocks","createdAt":"2026-05-24T12:44:42.979Z","createdBy":"el-2jua"}
{"blockedId":"el-62c","blockerId":"el-1bn","type":"blocks","createdAt":"2026-05-24T12:44:43.092Z","createdBy":"el-2jua"}
{"blockedId":"el-5z8","blockerId":"el-1nj","type":"blocks","createdAt":"2026-05-24T12:44:43.205Z","createdBy":"el-2jua"}
{"blockedId":"el-5z8","blockerId":"el-4hr","type":"blocks","createdAt":"2026-05-24T12:44:43.313Z","createdBy":"el-2jua"}
{"blockedId":"el-1t7","blockerId":"el-1bn","type":"blocks","createdAt":"2026-05-24T12:44:43.422Z","createdBy":"el-2jua"}
{"blockedId":"el-1t7","blockerId":"el-4hr","type":"blocks","createdAt":"2026-05-24T12:44:43.529Z","createdBy":"el-2jua"}
{"blockedId":"el-1t7","blockerId":"el-62c","type":"blocks","createdAt":"2026-05-24T12:44:43.647Z","createdBy":"el-2jua"}
{"blockedId":"el-5j5","blockerId":"el-1t7","type":"blocks","createdAt":"2026-05-24T12:44:43.758Z","createdBy":"el-2jua"}
{"blockedId":"el-2xl","blockerId":"el-1t7","type":"blocks","createdAt":"2026-05-24T12:44:43.876Z","createdBy":"el-2jua"}
{"blockedId":"el-4bc","blockerId":"el-1nj","type":"blocks","createdAt":"2026-05-24T12:44:43.987Z","createdBy":"el-2jua"}
{"blockedId":"el-4bc","blockerId":"el-1bn","type":"blocks","createdAt":"2026-05-24T12:44:44.096Z","createdBy":"el-2jua"}
{"blockedId":"el-4bc","blockerId":"el-62c","type":"blocks","createdAt":"2026-05-24T12:44:44.208Z","createdBy":"el-2jua"}
{"blockedId":"el-107","blockerId":"el-5z8","type":"blocks","createdAt":"2026-05-24T12:44:44.319Z","createdBy":"el-2jua"}
{"blockedId":"el-32e","blockerId":"el-5j5","type":"blocks","createdAt":"2026-05-24T12:44:44.429Z","createdBy":"el-2jua"}
{"blockedId":"el-32e","blockerId":"el-2xl","type":"blocks","createdAt":"2026-05-24T12:44:44.539Z","createdBy":"el-2jua"}
{"blockedId":"el-3ou","blockerId":"el-4bc","type":"blocks","createdAt":"2026-05-24T12:44:44.650Z","createdBy":"el-2jua"}
{"blockedId":"el-3ou","blockerId":"el-107","type":"blocks","createdAt":"2026-05-24T12:44:44.761Z","createdBy":"el-2jua"}
{"blockedId":"el-14w","blockerId":"el-32e","type":"blocks","createdAt":"2026-05-24T12:44:44.873Z","createdBy":"el-2jua"}
{"blockedId":"el-1ou","blockerId":"el-3ou","type":"blocks","createdAt":"2026-05-24T12:44:44.987Z","createdBy":"el-2jua"}
{"blockedId":"el-1ou","blockerId":"el-14w","type":"blocks","createdAt":"2026-05-24T12:44:45.107Z","createdBy":"el-2jua"}
{"blockedId":"el-375","blockerId":"el-26p","type":"replies-to","createdAt":"2026-05-24T13:21:42.486Z","createdBy":"el-2i1s"}
{"blockedId":"el-3n4","blockerId":"el-31p","type":"replies-to","createdAt":"2026-05-24T13:21:46.044Z","createdBy":"el-13ju"}
{"blockedId":"el-3jer","blockerId":"el-1xx","type":"replies-to","createdAt":"2026-05-24T13:24:47.580Z","createdBy":"el-4350"}
{"blockedId":"el-1afv","blockerId":"el-1ozw","type":"replies-to","createdAt":"2026-05-24T13:32:42.658Z","createdBy":"el-51a8"}
File diff suppressed because one or more lines are too long
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OpenSpec is the source of truth. Superpowers is the default workflow. Keep changes small, scoped, and verified.
## Communication
All agent output, code comments, commit messages, documentation, and artifacts must be in **English** unless the user explicitly requests another language.
## Priority order
1. Current user instruction
@@ -75,7 +71,6 @@ Do not:
* Introduce new dependencies without clear justification.
* Treat existing code as more authoritative than OpenSpec for intended behavior.
* Decide product behavior silently when the spec is unclear.
* Run `docker compose` commands (build, up, down, etc.) without explicit user approval and proper isolation (e.g., feature branches, separate worktrees, or staged rollouts). Docker Compose operations are deployment-level changes that can affect running services, shared volumes, and network state. Always ask first.
If scope must change, propose an OpenSpec update first.
@@ -92,31 +87,6 @@ Do not claim completion without verification evidence.
## Git workflow
### Branching strategy
For every spec change or new functionality:
1. Create a new branch from `dev` with a proper prefix:
- `feat/` for new features (e.g., `feat/tool-workshop`)
- `fix/` for bug fixes (e.g., `fix/terminal-tty`)
- `refactor/` for refactors (e.g., `refactor/api-cleanup`)
- `docs/` for documentation (e.g., `docs/api-guide`)
- `chore/` for maintenance (e.g., `chore/update-deps`)
2. Branch name should reference the OpenSpec change name when applicable.
3. Do not commit directly to `main` or `dev`.
### Completion and merge
When implementation is complete and verified:
1. Ensure all tests pass and quality gates are met.
2. Stage all changes with `git add -A`.
3. Create a commit with a proper conventional commit message (see below).
4. Switch to `dev`: `git checkout dev`.
5. Merge the feature branch: `git merge --no-ff <branch-name>`.
6. Push to remote: `git push origin dev`.
7. Delete the local feature branch if desired: `git branch -d <branch-name>`.
### Auto-commit on spec completion
When an OpenSpec change is fully implemented and all tasks are complete:
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# apps (index)
dir: apps
## role
Contains the main deployable application modules or entry points for the project.
## parent
index: ./.pi-map.index.md
map: ./.pi-map.md
## children
- apps/api
index: apps/api/.pi-map.index.md
map: apps/api/.pi-map.md
- apps/web
index: apps/web/.pi-map.index.md
map: apps/web/.pi-map.md
## files
## links
index: apps/.pi-map.index.md
map: apps/.pi-map.md
## workflows
-
## dirty
-
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# apps
dir: apps
index: apps/.pi-map.index.md
## role
Contains the main deployable application modules or entry points for the project.
## files
## arch
Modular monolith or microservices architecture with separate application boundaries, each potentially having its own configuration, dependencies, and lifecycle.
## tags
-
## symbols
-
## workflows
-
## dirty
-
-42
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# Python cache
__pycache__/
*.py[cod]
*$py.class
*.so
# Virtual environments
.venv/
venv/
env/
# Test artifacts
.pytest_cache/
.coverage
htmlcov/
# IDE
.idea/
.vscode/
*.swp
*.swo
# Git
.git/
.gitignore
# Local env files
.env
.env.local
# Alembic cache
alembic/versions/__pycache__/
# Pi lens cache
.pi-lens/
# Documentation
docs/
*.md
# Scripts not needed in container
scripts/
-568
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{
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{
"id": "python-cross-language-method",
"name": "Cross-Language Method Leakage",
"severity": "warning",
"language": "python",
"message": "'{METHOD}' is not a Python method — likely a {LANG} idiom leaking in",
"query": " (call\n function: (attribute\n object: (_) @OBJ\n attribute: (identifier) @METHOD)\n (#match? @METHOD \"^(push|forEach|indexOf|charAt|substring|hasOwnProperty|unshift|flatMap|padStart|padEnd|trimStart|trimEnd|equals|isEmpty|println|printf|getClass|hashCode|toCharArray|getBytes|compareTo|equalsIgnoreCase|startsWith|endsWith|each|collect|select|reject|detect|inject|chomp|chop|gsub|upcase|downcase|present|blank|Add|Contains|ToLower|ToUpper|Trim|Substring|WriteLine|ReadLine|TryParse|forEach|includes|assign|freeze|splice|unshift|shift|flatMap)$\"))",
"metavars": [
"OBJ",
"METHOD"
],
"post_filter": "match_captures",
"post_filter_params": {
"METHOD": "^(push|forEach|indexOf|charAt|substring|hasOwnProperty|unshift|flatMap|padStart|padEnd|trimStart|trimEnd|equals|isEmpty|println|printf|getClass|hashCode|toCharArray|getBytes|compareTo|equalsIgnoreCase|startsWith|endsWith|each|collect|select|reject|detect|inject|chomp|chop|gsub|upcase|downcase|present|blank|Add|Contains|ToLower|ToUpper|Trim|Substring|WriteLine|ReadLine|TryParse|forEach|includes|assign|freeze|splice|unshift|shift|flatMap)$"
},
"defect_class": "hallucination",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-cross-language-method.yml"
},
{
"id": "python-debugger",
"name": "Debugger Statement",
"severity": "warning",
"language": "python",
"message": "Debugger call '{{FUNC}}' — remove before committing",
"query": " (call\n function: (identifier) @FUNC\n (#eq? @FUNC \"breakpoint\"))\n\n (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FUNC)\n (#eq? @MOD \"pdb\")\n (#match? @FUNC \"^(set_trace|post_mortem|pm|run|runcall)$\"))",
"metavars": [
"FUNC",
"MOD"
],
"defect_class": "safety",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-debugger.yml"
},
{
"id": "python-empty-except",
"name": "Empty Except Block",
"severity": "warning",
"language": "python",
"message": "Except block only contains 'pass' — handle or re-raise the exception",
"query": " (try_statement\n (except_clause\n body: (block) @BODY))",
"metavars": [
"BODY"
],
"post_filter": "python_empty_except",
"defect_class": "silent-error",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-empty-except.yml"
},
{
"id": "python-hallucinated-import",
"name": "Hallucinated Import",
"severity": "warning",
"language": "python",
"message": "Hallucinated import — '{NAME}' does not exist in '{MODULE}'",
"query": " (import_from_statement\n module_name: (dotted_name) @MODULE\n name: (dotted_name) @NAME)",
"metavars": [
"MODULE",
"NAME"
],
"post_filter": "match_captures",
"post_filter_params": {
"MODULE": "^(requests|flask|django|typing|collections|asyncio|json|unittest|pytest|urllib|sqlalchemy)$",
"NAME": "^(JSONResponse|HTMLResponse|RedirectResponse|StreamingResponse|Depends|Query|Path|Body|Header|Cookie|Form|File|UploadFile|FastAPI|APIRouter|HTTPException|BackgroundTasks|dataclass|fields|BaseModel|Field|validator|aiohttp|parse|stringify|fixture|TestCase|get|post|put|delete|Model|Session|Column|Integer|String)$"
},
"defect_class": "hallucination",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-hallucinated-import.yml"
},
{
"id": "python-hardcoded-secrets",
"name": "Hardcoded Secret",
"severity": "warning",
"language": "python",
"message": "Hardcoded {{VARNAME}} — use environment variables or a secrets manager",
"query": " (assignment\n left: (identifier) @VARNAME\n right: (string) @VALUE)",
"metavars": [
"VARNAME",
"VALUE"
],
"post_filter": "check_secret_pattern",
"defect_class": "secrets",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-hardcoded-secrets.yml"
},
{
"id": "python-insecure-deserialization",
"name": "Insecure Deserialization",
"severity": "error",
"language": "python",
"message": "Potential insecure deserialization sink — avoid unsafe loaders",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list (_) @DATA)\n (#match? @MOD \"^(pickle|yaml)$\")\n (#match? @FN \"^(load|loads|unsafe_load)$\"))",
"metavars": [
"MOD",
"FN",
"DATA"
],
"post_filter": "py_insecure_deserialization_sink",
"defect_class": "injection",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-insecure-deserialization.yml"
},
{
"id": "python-insecure-random",
"name": "Insecure Randomness",
"severity": "warning",
"language": "python",
"message": "Insecure randomness source detected — use secrets or os.urandom for security-sensitive values",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list) @ARGS\n (#eq? @MOD \"random\")\n (#match? @FN \"^(random|randint|randrange|choice|choices)$\"))",
"metavars": [
"MOD",
"FN",
"ARGS"
],
"defect_class": "injection",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-insecure-random.yml"
},
{
"id": "python-mutable-class-attr",
"name": "Mutable Class Attribute",
"severity": "warning",
"language": "python",
"message": "Class attribute '{{VARNAME}}' is mutable — shared across all instances",
"query": " (class_definition\n body: (block\n (expression_statement\n (assignment\n left: (identifier) @VARNAME\n right: [\n (list) @VALUE\n (dictionary) @VALUE\n (set) @VALUE\n ]))))",
"metavars": [
"VARNAME",
"VALUE"
],
"post_filter": "not_in_function",
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-mutable-class-attr.yml"
},
{
"id": "python-path-traversal",
"name": "Path Traversal Risk",
"severity": "warning",
"language": "python",
"message": "Potential path traversal sink — sanitize and constrain file paths",
"query": " [\n (call\n function: (identifier) @FN\n arguments: (argument_list\n [(identifier) (binary_operator) (call)] @PATH))\n (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list\n [(identifier) (binary_operator) (call)] @PATH))\n ]\n (#match? @FN \"^(open|read_text|read_bytes|write_text|write_bytes|remove|unlink|rmdir)$\")",
"metavars": [
"MOD",
"FN",
"PATH"
],
"post_filter": "py_path_traversal_sink",
"defect_class": "injection",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-path-traversal.yml"
},
{
"id": "python-print-statement",
"name": "Print Statement in Production",
"severity": "warning",
"language": "python",
"message": "print() — remove debug output before committing",
"query": " (call\n function: (identifier) @FUNC\n (#eq? @FUNC \"print\")\n arguments: (argument_list) @ARGS)",
"metavars": [
"FUNC",
"ARGS"
],
"post_filter": "not_in_test_block",
"defect_class": "safety",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-print-statement.yml"
},
{
"id": "python-raise-string",
"name": "Raise String Instead of Exception",
"severity": "warning",
"language": "python",
"message": "raise with string literal — Python 3 requires exception instances",
"query": " (raise_statement\n (string) @VALUE)",
"metavars": [
"VALUE"
],
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-raise-string.yml"
},
{
"id": "python-sleep-in-test",
"name": "time.sleep in Test",
"severity": "warning",
"language": "python",
"message": "time.sleep() in test — use synchronisation primitives or polling helpers instead of fixed sleeps",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n (#eq? @MOD \"time\")\n (#eq? @FN \"sleep\")) @CALL",
"metavars": [
"MOD",
"FN",
"CALL"
],
"defect_class": "async-misuse",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-sleep-in-test.yml"
},
{
"id": "python-sql-injection",
"name": "SQL Injection Risk",
"severity": "error",
"language": "python",
"message": "Potential SQL injection sink — use parameterized queries",
"query": " (call\n function: (attribute\n object: (_) @OBJ\n attribute: (identifier) @FN)\n arguments: (argument_list\n [(binary_operator) (identifier) (call)] @SQL\n (_)*))",
"metavars": [
"OBJ",
"FN",
"SQL"
],
"post_filter": "py_sql_injection_sink",
"defect_class": "injection",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-sql-injection.yml"
},
{
"id": "python-ssrf",
"name": "SSRF Risk",
"severity": "warning",
"language": "python",
"message": "Potential SSRF sink — validate/allowlist outbound URLs",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list\n [(identifier) (subscript) (call)] @URL)\n (#eq? @MOD \"requests\")\n (#match? @FN \"^(get|post|put|patch|delete|request|head|options)$\"))",
"metavars": [
"MOD",
"FN",
"URL"
],
"post_filter": "py_ssrf_sink",
"defect_class": "injection",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-ssrf.yml"
},
{
"id": "python-subprocess-shell",
"name": "subprocess with shell=True",
"severity": "warning",
"language": "python",
"message": "subprocess called with shell=True — command injection risk if any argument is user-controlled",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list\n (keyword_argument\n name: (identifier) @KW\n value: (true) @VAL))\n (#eq? @MOD \"subprocess\")\n (#match? @FN \"^(run|Popen|call|check_output|check_call)$\")\n (#eq? @KW \"shell\"))",
"metavars": [
"MOD",
"FN",
"KW"
],
"defect_class": "injection",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-subprocess-shell.yml"
},
{
"id": "python-thread-global-write",
"name": "Threaded Shared State Risk",
"severity": "warning",
"language": "python",
"message": "Thread creation detected — ensure shared state mutations are synchronized",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list) @ARGS)\n (#eq? @MOD \"threading\")\n (#eq? @FN \"Thread\")",
"metavars": [
"MOD",
"FN",
"ARGS"
],
"defect_class": "async-misuse",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-thread-global-write.yml"
},
{
"id": "python-unsafe-regex",
"name": "Unsafe Dynamic Regex",
"severity": "warning",
"language": "python",
"message": "re.{{FUNC}}() with variable pattern — ReDoS risk if pattern is user-controlled",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FUNC)\n arguments: (argument_list\n (identifier) @PATTERN)\n (#eq? @MOD \"re\")\n (#match? @FUNC \"^(compile|match|search|fullmatch|findall|finditer|sub|subn|split)$\"))",
"metavars": [
"MOD",
"FUNC",
"PATTERN"
],
"defect_class": "injection",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-unsafe-regex.yml"
},
{
"id": "python-weak-hash",
"name": "Weak Hash Primitive",
"severity": "error",
"language": "python",
"message": "Weak hash primitive detected (MD5/SHA1) — use SHA-256+ for security-sensitive contexts",
"query": " (call\n function: (attribute\n object: (identifier) @MOD\n attribute: (identifier) @FN)\n arguments: (argument_list) @ARGS\n (#eq? @MOD \"hashlib\")\n (#match? @FN \"^(md5|sha1)$\"))",
"metavars": [
"MOD",
"FN",
"ARGS"
],
"defect_class": "injection",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/python-weak-hash.yml"
},
{
"id": "return-in-generator",
"name": "Return with Value in Generator",
"severity": "error",
"language": "python",
"message": "'return' with a value should not be used in a generator function",
"query": " (function_definition\n body: (block\n (return_statement\n (_) @RETURN_VAL) @RETURN)) @FUNCTION",
"metavars": [
"FUNCTION",
"RETURN",
"RETURN_VAL"
],
"post_filter": "is_generator_with_valued_return",
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/return-in-generator.yml"
},
{
"id": "return-in-init",
"name": "Return Value in __init__",
"severity": "error",
"language": "python",
"message": "__init__ should not return a value — it must always return None",
"query": " (function_definition\n name: (identifier) @NAME (#eq? @NAME \"__init__\")\n body: (block\n (return_statement\n (_) @RETURN_VAL) @RETURN))",
"metavars": [
"NAME",
"RETURN",
"RETURN_VAL"
],
"post_filter": "has_return_value",
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/return-in-init.yml"
},
{
"id": "send-file-mimetype",
"name": "send_file Should Specify Mimetype or Download Name",
"severity": "error",
"language": "python",
"message": "send_file should specify 'mimetype' or 'download_name' when used with file-like objects",
"query": " (call\n function: (identifier) @FUNC (#eq? @FUNC \"send_file\")\n arguments: (argument_list\n (_) @FIRST_ARG\n (keyword_argument)? @KW))",
"metavars": [
"FUNC",
"FIRST_ARG",
"KW"
],
"post_filter": "missing_mimetype_and_download_name",
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/send-file-mimetype.yml"
},
{
"id": "unreachable-except",
"name": "Unreachable Except Clause",
"severity": "warning",
"language": "python",
"message": "Unreachable except clause — earlier except catches all",
"query": " (try_statement\n (except_clause\n \"except\") @GENERAL\n (except_clause\n \"except\"\n (identifier) @SPECIFIC))",
"metavars": [
"GENERAL",
"SPECIFIC"
],
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/unreachable-except.yml"
},
{
"id": "wildcard-import",
"name": "Wildcard Import",
"severity": "warning",
"language": "python",
"message": "Wildcard import — pollutes namespace, hard to track origin",
"query": " (import_from_statement\n module_name: (dotted_name) @MODULE\n (wildcard_import) @WILDCARD)",
"metavars": [
"MODULE",
"WILDCARD"
],
"defect_class": "safety",
"inline_tier": "warning",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/wildcard-import.yml"
},
{
"id": "yield-return-outside-function",
"name": "Yield/Return Outside Function",
"severity": "error",
"language": "python",
"message": "{{STATEMENT}} used outside function — syntax error",
"query": " (module\n (expression_statement\n (yield) @STATEMENT))\n (module\n (expression_statement\n (yield_expression) @STATEMENT))\n (module\n (return_statement) @STATEMENT)",
"metavars": [
"STATEMENT"
],
"defect_class": "correctness",
"inline_tier": "blocking",
"filePath": "/home/alex/.npm-global/lib/node_modules/pi-lens/rules/tree-sitter-queries/python/yield-return-outside-function.yml"
}
]
}
-45
View File
@@ -1,45 +0,0 @@
# apps/api (index)
dir: apps/api
## role
Self-hosted FastAPI backend API that manages projects, git repositories, and development tools via Docker instances.
## parent
index: apps/.pi-map.index.md
map: apps/.pi-map.md
## children
- apps/api/.pi-lens
index: apps/api/.pi-lens/.pi-map.index.md
map: apps/api/.pi-lens/.pi-map.md
- apps/api/.pytest_cache
index: apps/api/.pytest_cache/.pi-map.index.md
map: apps/api/.pytest_cache/.pi-map.md
- apps/api/.venv-test
index: apps/api/.venv-test/.pi-map.index.md
map: apps/api/.venv-test/.pi-map.md
- apps/api/alembic
index: apps/api/alembic/.pi-map.index.md
map: apps/api/alembic/.pi-map.md
- apps/api/src
index: apps/api/src/.pi-map.index.md
map: apps/api/src/.pi-map.md
- apps/api/tests
index: apps/api/tests/.pi-map.index.md
map: apps/api/tests/.pi-map.md
- apps/api/uploads
index: apps/api/uploads/.pi-map.index.md
map: apps/api/uploads/.pi-map.md
## files
- .dockerignore
- Dockerfile
- README.md
- alembic.ini
- pyproject.toml
- uv.lock
- wait-for-db.sh
## links
index: apps/api/.pi-map.index.md
map: apps/api/.pi-map.md
## workflows
-
## dirty
-
-25
View File
@@ -1,25 +0,0 @@
# apps/api
dir: apps/api
index: apps/api/.pi-map.index.md
## role
Self-hosted FastAPI backend API that manages projects, git repositories, and development tools via Docker instances.
## files
- .dockerignore | Specifies files and directories to exclude from Docker build context to reduce image size and avoid copying unnecessary files into containers. | dep: Docker
- Dockerfile | Multi-stage Docker build for a Python application with Docker socket access, Cloudflare tunneling, and database dependency waiting | dep: python:3.11-slim, gcc, libpq-dev, docker-ce-cli, docker-compose-plugin, cloudflared, uvicorn, pyproject.toml dependencies
- README.md | Documentation for a self-hosted FastAPI backend API that manages projects, git repositories, and development tools via Docker instances. | dep: FastAPI, SQLAlchemy, PostgreSQL, asyncpg, Alembic, Docker, Docker Compose, Authentik, uvicorn, pytest, ruff, mypy
- alembic.ini | Configuration file for Alembic database migration tool connecting to a PostgreSQL database with async driver | dep: alembic, sqlalchemy, asyncpg, PostgreSQL
- pyproject.toml | Defines Python project metadata, dependencies, and tool configurations for a FastAPI-based backend API called "headquarter-api" | dep: fastapi, uvicorn, sqlalchemy, asyncpg, alembic, pydantic, pydantic-settings, python-multipart, httpx, structlog, cryptography, pytest, pytest-asyncio, mypy, ruff, aiosqlite
- uv.lock | Lock file for the uv Python package manager that pins exact dependency versions and their artifact hashes for reproducible installations | dep: uv, Python 3.11+, aiosqlite, alembic, annotated-doc, annotated-types, anyio, ast-serialize, asyncpg, and many other PyPI packages
- wait-for-db.sh | Wait for a PostgreSQL database to become available before executing a command, with configurable retry logic. | dep: nc (netcat), sh (POSIX shell), sleep
## arch
Async Python/FastAPI with PostgreSQL (Alembic migrations), multi-stage Docker deployment with Cloudflare tunneling, uv package management, and containerized service orchestration.
## tags
docker, alembic, python, database, fastapi, postgresql, asyncpg, uvicorn
## symbols
-
## workflows
-
## dirty
-
+2 -3
View File
@@ -27,7 +27,6 @@ WORKDIR /app
RUN apt-get update && apt-get install -y --no-install-recommends \
libpq5 \
git \
openssh-client \
netcat-openbsd \
ca-certificates \
curl \
@@ -50,8 +49,8 @@ ENV PATH=/root/.local/bin:$PATH
# Copy application code
COPY --chown=appuser:appgroup . .
# Create directories for repo, instance, and workspace storage
RUN mkdir -p /data/repos /data/instances /data/working-copies && chown -R appuser:appgroup /data
# Create directories for repo and instance storage
RUN mkdir -p /data/repos /data/instances && chown -R appuser:appgroup /data
# Copy wait-for-db script
COPY wait-for-db.sh /usr/local/bin/wait-for-db.sh
-25
View File
@@ -1,25 +0,0 @@
# apps/api/alembic (index)
dir: apps/api/alembic
## role
Database migration infrastructure for the API application, providing version-controlled schema evolution with async SQLAlchemy support.
## parent
index: apps/api/.pi-map.index.md
map: apps/api/.pi-map.md
## children
- apps/api/alembic/versions
index: apps/api/alembic/versions/.pi-map.index.md
map: apps/api/alembic/versions/.pi-map.md
## files
- env.py
- script.py.mako
## links
index: apps/api/alembic/.pi-map.index.md
map: apps/api/alembic/.pi-map.md
## workflows
- change alembic behavior
read: env.py, script.py.mako
- explore alembic subdirectories
index: apps/api/alembic/versions/.pi-map.index.md
## dirty
-
-30
View File
@@ -1,30 +0,0 @@
# apps/api/alembic
dir: apps/api/alembic
index: apps/api/alembic/.pi-map.index.md
## role
Database migration infrastructure for the API application, providing version-controlled schema evolution with async SQLAlchemy support.
## files
- env.py | Configures Alembic database migration environment with async SQLAlchemy support for a project. | exp: func:run_migrations_offline() → None, call:context.configure, call:context.begin_transaction, call:context.run_migrations, func:do_run_migrations(connection: Connection) → None, call:context.configure, call:context.begin_transaction, call:context.run_migrations, func:run_async_migrations() → None, call:async_engine_from_config, call:config.get_section, call:connectable.connect, call:connection.run_sync, call:connectable.dispose, func:run_migrations_online() → None, call:asyncio.run, call:run_async_migrations | dep: logging.config, alembic, sqlalchemy, sqlalchemy.engine, sqlalchemy.ext.asyncio, src.config, src.models, asyncio
- script.py.mako | Alembic database migration script template that generates upgrade/downgrade functions for SQLAlchemy schema migrations | dep: alembic, sqlalchemy
## arch
Alembic migration framework with Mako templating for generating revision scripts, async SQLAlchemy engine configuration, and autogenerate capabilities for schema change tracking.
## tags
migrations, run, sqlalchemy, async, alembic, call:context.configure, call:context.begin, transaction
## symbols
- run_migrations_offline
- do_run_migrations
- run_async_migrations
- run_migrations_online
- call:context.configure
- call:context.begin_transaction
- call:context.run_migrations
- call:async_engine_from_config
## workflows
- change alembic behavior
read: env.py, script.py.mako
- explore alembic subdirectories
index: apps/api/alembic/versions/.pi-map.index.md
## dirty
-
@@ -1,69 +0,0 @@
# apps/api/alembic/versions (index)
dir: apps/api/alembic/versions
## role
Manages incremental database schema evolution for the API application using Alembic migrations, tracking all table creations, column additions, relationship changes, and data transformations over the project's lifecycle.
## parent
index: apps/api/alembic/.pi-map.index.md
map: apps/api/alembic/.pi-map.md
## children
-
## files
- 0001_initial_schema.py
- 0002_refresh_tokens.py
- 0003_user_configs.py
- 0004_tool_types.py
- 0005_ssh_keys_timestamps.py
- 0006_tool_instances.py
- 0007_instance_container_name.py
- 0008_tool_type_category.py
- 0009_tool_configs.py
- 0010_tool_type_default_port.py
- 0011_tool_instance_tunnel_fields.py
- 0012_default_port_req.py
- 0013_add_config_profiles.py
- 0013_add_probe_result.py
- 0014_add_profile_resolver_fields.py
- 0014_merge_heads.py
- 0015_single_interface.py
- 069d3da4dc9b_add_ssh_key_id_to_config_profiles.py
- 20260527160017_add_pi_agent_tool_type.py
- 2026_05_22_add_clone_mode.py
- 2026_05_23_remove_is_builtin.py
- 2026_05_24_220141_add_startup_command.py
- 2026_05_24_add_config_profiles.py
- 2026_05_26_add_git_mounts.py
- 2026_05_27_external_repos.py
- 2026_05_28_add_monitoring_tables.py
- 2026_05_28_add_terminal_sessions_table.py
- 2026_05_28_add_tool_definition_manifests.py
- 2026_05_28_drop_tool_configs_and_config_folders.py
- 2026_05_29_add_notifications_table.py
- 2026_05_29_add_ssh_key_ids_to_tool_instances.py
- 2026_05_29_drop_ssh_key_id_from_config_profiles.py
- 2026_05_29_fix_code_server_bind_addr.py
- 2026_05_29_fix_code_server_bind_addr_port.py
- 2026_05_29_fix_web_tool_bind_address.py
- 2026_05_29_remove_lsio_command_override.py
- 2026_05_29_remove_ssh_keys_mount_from_manifest.py
- 2026_06_01_add_workspaces.py
- 2026_06_13_make_clone_mode_nullable.py
- 398082499c30_add_tool_config_fields.py
- 6fc7bfcf199f_merge_remove_is_builtin_and_add_config_.py
- 86cec91fdb00_merge_profile_resolver_and_workspaces_.py
- 8c6d1dbd4798_remove_pi_config_and_state_mounts_from_.py
- 8ed7dd80973d_create_config_folders_table.py
- af8512103d67_add_tool_type_fields.py
- f3d2dc90ba3a_merge_single_interface_and_clone_mode.py
## links
index: apps/api/alembic/versions/.pi-map.index.md
map: apps/api/alembic/versions/.pi-map.md
## workflows
- change versions behavior
read: 0001_initial_schema.py, 0002_refresh_tokens.py, 0003_user_configs.py
- change versions CLI
read: 2026_05_24_220141_add_startup_command.py, 2026_05_29_remove_lsio_command_override.py
- change versions config
read: 0003_user_configs.py, 0009_tool_configs.py, 0013_add_config_profiles.py
## dirty
-
-76
View File
@@ -1,76 +0,0 @@
# apps/api/alembic/versions
dir: apps/api/alembic/versions
index: apps/api/alembic/versions/.pi-map.index.md
## role
Manages incremental database schema evolution for the API application using Alembic migrations, tracking all table creations, column additions, relationship changes, and data transformations over the project's lifecycle.
## files
- 0001_initial_schema.py | Defines the initial database schema migration creating five tables (users, ssh_keys, projects, git_repositories, user_configs) with relationships, indexes, and constraints using Alembic. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.String, call:postgresql.UUID, call:sa.DateTime, call:sa.func.now, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, call:op.create_index, call:op.f, call:sa.Text, call:sa.ForeignKeyConstraint, call:sa.Boolean, call:postgresql.JSONB, func:downgrade() → None, call:op.drop_table, call:op.drop_index, call:op.f | dep: alembic, sqlalchemy.dialects, sqlalchemy, postgresql dialect
- 0002_refresh_tokens.py | Alembic database migration that creates a refresh_tokens table with indexes for user authentication token management | exp: func:upgrade() → None, call:op.get_bind, call:sa.inspect, call:inspector.has_table, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.String, call:sa.DateTime, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, call:inspector.get_indexes, call:op.f, call:op.create_index, func:downgrade() → None, call:op.get_bind, call:sa.inspect, call:inspector.has_table, call:inspector.get_indexes, call:op.f, call:op.drop_index, call:op.drop_table | dep: alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 0003_user_configs.py | Alembic database migration that creates a user_configs table with JSON configuration storage linked to users | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.UUID, call:sa.JSON, call:sa.DateTime, call:sa.text, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, func:downgrade() → None, call:op.drop_table | dep: typing, alembic, sqlalchemy
- 0004_tool_types.py | Alembic database migration that creates a tool_types table with metadata, templates, and versioning columns for a tool management system. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.Uuid, call:sa.String, call:sa.Text, call:sa.JSON, call:sa.Boolean, call:sa.ForeignKey, call:sa.DateTime, call:sa.text, func:downgrade() → None, call:op.drop_table | dep: typing, alembic, sqlalchemy
- 0005_ssh_keys_timestamps.py | Alembic database migration that adds created_at and updated_at timestamp columns to the ssh_keys table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.DateTime, call:sa.text, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 0006_tool_instances.py | Alembic database migration that creates a tool_instances table with columns for tracking deployed tool instances, their status, container info, and foreign key relationships to tool_types, git_repositories, projects, and users. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.text, call:sa.String, call:sa.Integer, call:sa.DateTime, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:op.create_index, func:downgrade() → None, call:op.drop_index, call:op.drop_table | dep: typing, alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 0007_instance_container_name.py | Alembic database migration that adds a nullable container_name column to the tool_instances table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.String, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 0008_tool_type_category.py | Alembic database migration that adds `category` and `interfaces` columns to the `tool_types` table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.String, call:sa.JSON, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 0009_tool_configs.py | Alembic database migration that creates a tool_configs table with UUID keys, foreign key relationships, and indexes for storing user/project tool configuration settings. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.text, call:sa.String, call:sa.Text, call:sa.DateTime, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:op.create_index, func:downgrade() → None, call:op.drop_index, call:op.drop_table | dep: typing, alembic, sqlalchemy.dialects, sqlalchemy, postgresql dialect
- 0010_tool_type_default_port.py | Alembic database migration that adds a nullable default_port column to the tool_types table. | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.Integer, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 0011_tool_instance_tunnel_fields.py | Alembic database migration that adds tunnel-related fields (public_url and tunnel_id) to the tool_instances table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.String, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 0012_default_port_req.py | Alembic database migration that populates null default_port values for existing tool types and then makes the column non-nullable | exp: func:upgrade() → None, call:op.execute, call:op.alter_column, call:sa.Integer, func:downgrade() → None, call:op.alter_column, call:sa.Integer | dep: typing, alembic, sqlalchemy
- 0013_add_config_profiles.py | Alembic database migration that adds config profiles, includes, mounts tables and links tool instances to profiles with defensive idempotent checks | exp: func:_table_exists(table_name: str) → bool, call:sa.inspect(op.get_bind()).has_table, call:op.get_bind, func:_column_exists(table_name: str, column_name: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_columns, call:op.get_bind, func:_index_exists(table_name: str, index_name: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_indexes, call:op.get_bind, func:_foreign_key_exists(table_name: str, constrained_columns: list[str], referred_table: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_foreign_keys, call:op.get_bind, call:foreign_key.get, func:upgrade() → None, call:_table_exists, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.String, call:sa.Text, call:sa.DateTime, call:sa.text, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, call:_index_exists, call:op.create_index, call:sa.Integer, call:_column_exists, call:op.add_column, call:_foreign_key_exists, call:op.create_foreign_key, func:downgrade() → None, call:op.drop_index, call:op.drop_constraint, call:op.drop_column, call:op.drop_table | dep: collections.abc, alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 0013_add_probe_result.py | Alembic database migration that adds a JSON probe_result column to the tool_instances table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 0014_add_profile_resolver_fields.py | Alembic database migration that adds profile resolver fields (project_id, tool_type_id, environment_variables, etc.) to config_profiles table and restructures config_mounts table (renaming mount_path to target_path, adding mode/files, removing content/source_profile_id). | exp: func:_table_exists(table_name: str) → bool, call:sa.inspect(op.get_bind()).has_table, call:op.get_bind, func:_column_exists(table_name: str, column_name: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_columns, call:op.get_bind, func:_index_exists(table_name: str, index_name: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_indexes, call:op.get_bind, func:_foreign_key_exists(table_name: str, constrained_columns: list[str], referred_table: str) → bool, call:_table_exists, call:sa.inspect(op.get_bind()).get_foreign_keys, call:op.get_bind, call:foreign_key.get, func:_foreign_key_names_for_column(table_name: str, column_name: str) → list[str], call:_table_exists, call:sa.inspect(op.get_bind()).get_foreign_keys, call:op.get_bind, call:foreign_key.get, call:names.append, func:upgrade() → None, call:_column_exists, call:op.add_column, call:sa.Column, call:postgresql.UUID, call:sa.JSON, call:sa.Text, call:sa.Integer, call:sa.Boolean, call:_foreign_key_exists, call:op.create_foreign_key, call:_index_exists, call:op.create_index, call:op.alter_column, call:sa.String, call:_foreign_key_names_for_column, call:op.drop_constraint, call:op.drop_column, func:downgrade() → None, call:op.add_column, call:sa.Column, call:postgresql.UUID, call:sa.Text, call:op.drop_column, call:op.alter_column, call:op.drop_index, call:op.drop_constraint | dep: collections.abc, alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 0014_merge_heads.py | Alembic merge migration that reconciles two divergent migration branches into a single history line | exp: func:upgrade() → None, func:downgrade() → None | dep: typing, alembic
- 0015_single_interface.py | Alembic database migration that replaces a JSON array `interfaces` column with `interface_type` string and `requires_port` boolean columns in the `tool_types` table, with dialect-specific data migration for PostgreSQL and SQLite. | exp: func:_get_dialect() → str, call:op.get_bind, func:upgrade() → None, call:_get_dialect, call:op.add_column, call:sa.Column, call:sa.String, call:sa.Boolean, call:op.execute, call:op.alter_column, call:op.drop_column, call:op.create_check_constraint, call:sa.text, func:downgrade() → None, call:_get_dialect, call:op.drop_constraint, call:op.add_column, call:sa.Column, call:postgresql.JSONB, call:sa.Text, call:op.execute, call:sa.JSON, call:op.drop_column | dep: typing, alembic, sqlalchemy.dialects, sqlalchemy, postgresql (dialect)
- 069d3da4dc9b_add_ssh_key_id_to_config_profiles.py | Alembic database migration that adds a nullable UUID foreign key column `ssh_key_id` to the `config_profiles` table referencing `ssh_keys.id` with SET NULL on delete | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.Uuid, call:sa.ForeignKey, func:downgrade() → None, call:op.drop_column | dep: alembic, sqlalchemy
- 20260527160017_add_pi_agent_tool_type.py | Alembic database migration that adds a "pi-agent" terminal-based coding tool type to a tool_types table with Docker configuration templates | exp: func:upgrade() → None, call:op.get_bind, call:conn.execute( sa.text("SELECT id FROM tool_types WHERE name = 'pi-agent'") ).fetchone, call:sa.text, call:json.dumps, func:downgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text | dep: json, typing, alembic, uuid, sqlalchemy
- 2026_05_22_add_clone_mode.py | Alembic database migration that adds ssh_key_id foreign key to git_repositories table and clone_mode/branch columns to tool_instances table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:postgresql.UUID, call:op.create_foreign_key, call:sa.String, func:downgrade() → None, call:op.drop_column, call:op.drop_constraint | dep: alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 2026_05_23_remove_is_builtin.py | Alembic database migration to remove the `is_builtin` column from the `tool_types` table | exp: func:upgrade() → None, call:op.execute, func:downgrade() → None, call:op.add_column, call:sa.Column, call:sa.Boolean | dep: alembic, sqlalchemy
- 2026_05_24_220141_add_startup_command.py | Alembic database migration that adds a nullable `startup_command` text column to the `tool_types` table. | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.Text, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 2026_05_24_add_config_profiles.py | Alembic database migration that creates config_profiles and config_profile_includes tables with indexes, and adds a foreign key column to tool_instances for managing user configuration profiles. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.text, call:sa.ForeignKey, call:sa.String, call:sa.Text, call:postgresql.JSONB, call:sa.Boolean, call:sa.DateTime, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, call:op.create_index, call:sa.Integer, call:op.add_column, func:downgrade() → None, call:op.drop_index, call:op.drop_column, call:op.drop_table | dep: typing, alembic, sqlalchemy.dialects, sqlalchemy, postgresql dialect
- 2026_05_26_add_git_mounts.py | Alembic database migration that adds a git_mounts JSON column to the config_profiles table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.JSON, func:downgrade() → None, call:op.drop_column | dep: typing, alembic, sqlalchemy
- 2026_05_27_external_repos.py | Alembic database migration that makes project_id nullable in git_repositories table to support external repositories and expands alembic_version version_num column to 64 characters. | exp: func:upgrade() → None, call:op.execute, call:op.alter_column, call:sa.UUID, func:downgrade() → None, call:op.alter_column, call:sa.UUID, call:op.execute | dep: typing, alembic, sqlalchemy
- 2026_05_28_add_monitoring_tables.py | Alembic database migration that creates monitoring tables (instance_events and health_checks) with indexes for tracking tool instance events and health checks | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.Uuid, call:sa.String, call:sa.Text, call:sa.JSON, call:sa.DateTime, call:sa.func.now, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:op.create_index, call:sa.Boolean, call:sa.Integer, func:downgrade() → None, call:op.drop_index, call:op.drop_table | dep: collections.abc, alembic, sqlalchemy
- 2026_05_28_add_terminal_sessions_table.py | Alembic database migration that creates a terminal_sessions table with tracking columns and foreign key to tool_instances | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.UUID, call:sa.String, call:sa.DateTime, call:sa.text, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:op.create_index, call:op.f, func:downgrade() → None, call:op.drop_index, call:op.f, call:op.drop_table | dep: collections.abc, alembic, sqlalchemy
- 2026_05_28_add_tool_definition_manifests.py | Alembic database migration that creates a tool_definition_manifests table, adds manifest-related columns to tool_types and tool_instances, and migrates the pi-agent tool from Dockerfile-based to manifest-based definitions with seed data. | exp: func:upgrade() → None, call:op.get_bind, call:op.create_table, call:sa.Column, call:sa.UUID, call:sa.String, call:sa.Text, call:sa.JSON, call:sa.Boolean, call:sa.TIMESTAMP, call:sa.func.now, call:sa.PrimaryKeyConstraint, call:sa.UniqueConstraint, call:sa.ForeignKeyConstraint, call:sa.CheckConstraint, call:conn.execute, call:sa.text, call:result.fetchone, call:op.add_column, call:op.create_foreign_key, call:op.drop_constraint, call:op.execute, call:json.dumps, call:str, func:downgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:op.drop_column, call:op.drop_constraint, call:op.drop_table | dep: json, uuid, typing, alembic, sqlalchemy
- 2026_05_28_drop_tool_configs_and_config_folders.py | Alembic database migration that drops `tool_configs` and `config_folders` tables with conditional existence checks and full downgrade recreation | exp: func:upgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:op.drop_table, func:downgrade() → None, call:op.create_table, call:sa.Column, call:sa.UUID, call:sa.String, call:sa.Text, call:sa.JSON, call:sa.Boolean, call:sa.TIMESTAMP, call:sa.func.now, call:sa.PrimaryKeyConstraint, call:sa.Integer | dep: typing, alembic, sqlalchemy
- 2026_05_29_add_notifications_table.py | Alembic database migration that creates a notifications table with user-linked, categorized, severity-graded messages supporting read/dismissed tracking and optimized querying indexes. | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.Uuid, call:sa.String, call:sa.Text, call:sa.JSON, call:sa.DateTime, call:sa.func.now, call:sa.ForeignKeyConstraint, call:sa.PrimaryKeyConstraint, call:op.create_index, call:sa.text, func:downgrade() → None, call:op.drop_index, call:op.drop_table | dep: collections.abc, alembic, sqlalchemy
- 2026_05_29_add_ssh_key_ids_to_tool_instances.py | Alembic database migration that adds a JSON column named ssh_key_ids to the tool_instances table | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.JSON, func:downgrade() → None, call:op.drop_column | dep: alembic, sqlalchemy
- 2026_05_29_drop_ssh_key_id_from_config_profiles.py | Alembic database migration that removes the ssh_key_id column from the config_profiles table | exp: func:upgrade() → None, call:op.drop_column, func:downgrade() → None, call:op.add_column, call:sa.Column, call:sa.Uuid, call:sa.ForeignKey | dep: alembic, sqlalchemy
- 2026_05_29_fix_code_server_bind_addr.py | Alembic database migration that fixes code-server tool type compose templates by replacing deprecated `--bind-addr` flag with `--host` flag | exp: func:upgrade() → None, call:op.get_bind, call:conn.execute( sa.text(""" SELECT id, compose_template FROM tool_types WHERE name = 'code-server' AND compose_template LIKE '%--bind-addr%' """) ).fetchall, call:sa.text, call:compose_template.replace( "--bind-addr 0.0.0.0:8443", "--host 0.0.0.0" ).replace, call:print, func:downgrade() → None | dep: typing, alembic, sqlalchemy
- 2026_05_29_fix_code_server_bind_addr_port.py | Alembic database migration that fixes code-server Docker compose templates and instance files by replacing broken `--host` flags with correct `--bind-addr 0.0.0.0:port` configurations | exp: func:_fix_tool_type_templates(conn) → None, call:conn.execute( sa.text(""" SELECT id, compose_template, default_port FROM tool_types WHERE name = 'code-server' AND compose_template LIKE '%--host%' """) ).fetchall, call:sa.text, call:compose_template.split, call:len, call:line.lstrip, call:new_lines.append, call:"\n".join, call:print, func:_fix_instance_compose_files(conn) → None, call:conn.execute( sa.text(""" SELECT column_name FROM information_schema.columns WHERE table_name = 'tool_instances' AND column_name = 'compose_path' """) ).fetchone, call:sa.text, call:print, call:conn.execute( sa.text(""" SELECT id, compose_path, tool_type_id FROM tool_instances WHERE compose_path IS NOT NULL """) ).fetchall, call:Path, call:path.exists, call:path.read_text, call:conn.execute( sa.text(""" SELECT default_port FROM tool_types WHERE id = :id """), {"id": tool_type_id}, ).fetchone, call:yaml.safe_load, call:data["services"].values, call:path.write_text, call:yaml.dump, func:upgrade() → None, call:op.get_bind, call:_fix_tool_type_templates, call:_fix_instance_compose_files, func:downgrade() → None | dep: typing, alembic, yaml, pathlib, sqlalchemy
- 2026_05_29_fix_web_tool_bind_address.py | Alembic database migration that updates code-server and jupyter-notebook tool type compose templates to bind to 0.0.0.0 | exp: func:_fix_code_server_compose(conn) → None, call:conn.execute( sa.text(""" SELECT id, compose_template, definition_type FROM tool_types WHERE name = 'code-server' """) ).fetchone, call:sa.text, call:compose_template.split, call:enumerate, call:len, call:line.lstrip, call:new_lines.append, call:image_line.lstrip, call:new_lines.index, call:new_lines.insert, call:"\n".join, call:print, func:_fix_jupyter_compose(conn) → None, call:conn.execute( sa.text(""" SELECT id, compose_template, definition_type FROM tool_types WHERE name = 'jupyter-notebook' """) ).fetchone, call:sa.text, call:compose_template.split, call:enumerate, call:new_lines.append, call:len, call:line.lstrip, call:"\n".join, call:print, func:upgrade() → None, call:op.get_bind, call:_fix_code_server_compose, call:_fix_jupyter_compose, func:downgrade() → None | dep: typing, alembic, sqlalchemy
- 2026_05_29_remove_lsio_command_override.py | Alembic database migration that removes broken command overrides containing --bind-addr or --host flags from LinuxServer.io code-server Docker Compose templates in both database tool_types records and on-disk instance compose files. | exp: func:upgrade() → None, call:op.get_bind, call:conn.execute( sa.text(""" SELECT id, compose_template FROM tool_types WHERE name = 'code-server' """) ).fetchall, call:sa.text, call:yaml.safe_load, call:data["services"].values, call:svc.get, call:yaml.dump, call:print, call:conn.execute( sa.text(""" SELECT column_name FROM information_schema.columns WHERE table_name = 'tool_instances' AND column_name = 'compose_path' """) ).fetchone, call:conn.execute( sa.text(""" SELECT id, compose_path FROM tool_instances WHERE compose_path IS NOT NULL """) ).fetchall, call:Path, call:path.exists, call:path.read_text, call:path.write_text, func:downgrade() → None | dep: collections.abc, alembic, yaml, pathlib, sqlalchemy, pathlib.Path, information_schema
- 2026_05_29_remove_ssh_keys_mount_from_manifest.py | Alembic database migration that removes (or restores) the ssh_keys mount from a JSON manifest stored in the tool_definition_manifests table for the pi-agent tool definition. | exp: func:upgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:isinstance, call:json.loads, call:manifest.get, call:len, call:m.get, call:json.dumps, func:downgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:isinstance, call:json.loads, call:manifest.get, call:any, call:m.get, call:mounts.append, call:json.dumps | dep: json, typing, alembic, sqlalchemy
- 2026_06_01_add_workspaces.py | Alembic database migration that creates a workspaces table with foreign keys to git_repositories and users, adds indexes, and adds a workspace_id column to tool_instances | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:sa.Uuid, call:sa.String, call:sa.ForeignKey, call:sa.DateTime, call:sa.text, call:sa.UniqueConstraint, call:op.create_index, call:op.add_column, func:downgrade() → None, call:op.drop_index, call:op.drop_column, call:op.drop_table | dep: collections.abc, alembic, sqlalchemy
- 2026_06_13_make_clone_mode_nullable.py | Alembic database migration that makes the `clone_mode` column in `tool_instances` table nullable to allow NULL values for new rows | exp: func:upgrade() → None, call:op.alter_column, call:sa.String, func:downgrade() → None, call:op.alter_column, call:sa.String | dep: alembic, sqlalchemy
- 398082499c30_add_tool_config_fields.py | Alembic database migration that adds five new columns (port_override, start_command, working_directory, environment_variables, volumes) to the tool_configs table with a port range check constraint. | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.Integer, call:sa.Text, call:postgresql.JSONB, call:op.create_check_constraint, call:sa.text, func:downgrade() → None, call:op.drop_constraint, call:op.drop_column | dep: alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- 6fc7bfcf199f_merge_remove_is_builtin_and_add_config_.py | Alembic database migration that merges two parallel revision branches (removing is_builtin and adding config_profiles) into a single history line | exp: func:upgrade() → None, func:downgrade() → None | dep: alembic
- 86cec91fdb00_merge_profile_resolver_and_workspaces_.py | Alembic database migration that merges two divergent migration branches (profile resolver and workspaces) into a single head | exp: func:upgrade() → None, func:downgrade() → None | dep: alembic
- 8c6d1dbd4798_remove_pi_config_and_state_mounts_from_.py | Alembic database migration that removes pi_state and pi_config mounts from the pi-agent manifest in upgrade, and restores them in downgrade | exp: func:_load_manifest(manifest_json), call:isinstance, call:json.loads, func:upgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:_load_manifest, call:manifest.get, call:len, call:m.get, call:json.dumps, func:downgrade() → None, call:op.get_bind, call:conn.execute, call:sa.text, call:result.fetchone, call:_load_manifest, call:manifest.get, call:m.get, call:mounts.append, call:json.dumps | dep: json, alembic, sqlalchemy
- 8ed7dd80973d_create_config_folders_table.py | Alembic database migration that creates a config_folders table with user-owned configuration folders supporting JSONB file storage and project overrides | exp: func:upgrade() → None, call:op.create_table, call:sa.Column, call:postgresql.UUID, call:sa.text, call:sa.ForeignKey, call:sa.String, call:sa.Text, call:postgresql.JSONB, call:sa.Boolean, call:sa.DateTime, call:sa.UniqueConstraint, call:op.create_index, func:downgrade() → None, call:op.drop_index, call:op.drop_table | dep: alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- af8512103d67_add_tool_type_fields.py | Alembic database migration that adds new columns (definition_type, dockerfile_template, build_context, readiness_probe) to the tool_types table with a CHECK constraint on definition_type. | exp: func:upgrade() → None, call:op.add_column, call:sa.Column, call:sa.String, call:sa.Text, call:postgresql.JSONB, call:op.create_check_constraint, call:sa.text, func:downgrade() → None, call:op.drop_constraint, call:op.drop_column | dep: alembic, sqlalchemy.dialects, sqlalchemy, sqlalchemy.dialects.postgresql
- f3d2dc90ba3a_merge_single_interface_and_clone_mode.py | Alembic database migration that merges two prior revisions (single_interface and clone_mode) into a single migration path | exp: func:upgrade() → None, func:downgrade() → None | dep: typing, alembic
## arch
Linear and branched migration pattern using Alembic's revision system with merge migrations to reconcile divergent branches; each migration is an imperative upgrade/downgrade script containing raw SQL/DDL operations, with some migrations including data seeding and dialect-specific logic (PostgreSQL/SQLite), but lacks consistent naming convention (mixed timestamp and numeric prefixes) indicating organic evolution rather than planned schema design.
## tags
column, table, call:op.drop, downgrade, alembic, upgrade, key, call:sa.text
## symbols
- upgrade
- downgrade
- _table_exists
- _column_exists
- _index_exists
- _foreign_key_exists
- _foreign_key_names_for_column
- _get_dialect
## workflows
- change versions behavior
read: 0001_initial_schema.py, 0002_refresh_tokens.py, 0003_user_configs.py
- change versions CLI
read: 2026_05_24_220141_add_startup_command.py, 2026_05_29_remove_lsio_command_override.py
- change versions config
read: 0003_user_configs.py, 0009_tool_configs.py, 0013_add_config_profiles.py
## dirty
-
@@ -5,7 +5,7 @@ Revises: 0012_default_port_req
Create Date: 2026-05-24 12:00:00.000000
"""
from collections.abc import Sequence
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
@@ -13,181 +13,81 @@ from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision: str = "0013_add_config_profiles"
down_revision: str | None = "0012_default_port_req"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def _table_exists(table_name: str) -> bool:
return sa.inspect(op.get_bind()).has_table(table_name)
def _column_exists(table_name: str, column_name: str) -> bool:
if not _table_exists(table_name):
return False
return column_name in {
column["name"] for column in sa.inspect(op.get_bind()).get_columns(table_name)
}
def _index_exists(table_name: str, index_name: str) -> bool:
if not _table_exists(table_name):
return False
return index_name in {
index["name"] for index in sa.inspect(op.get_bind()).get_indexes(table_name)
}
def _foreign_key_exists(
table_name: str,
constrained_columns: list[str],
referred_table: str,
) -> bool:
if not _table_exists(table_name):
return False
for foreign_key in sa.inspect(op.get_bind()).get_foreign_keys(table_name):
if (
foreign_key.get("constrained_columns") == constrained_columns
and foreign_key.get("referred_table") == referred_table
):
return True
return False
down_revision: Union[str, None] = "0012_default_port_req"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
# Earlier branches may already have created config_profiles. Keep this
# migration defensive so databases can converge onto the current graph.
if not _table_exists("config_profiles"):
op.create_table(
"config_profiles",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("user_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("name", sa.String(length=255), nullable=False),
sa.Column("description", sa.Text(), nullable=True),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.Column(
"updated_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.ForeignKeyConstraint(["user_id"], ["users.id"], ondelete="CASCADE"),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint(
"user_id", "name", name="uq_config_profiles_user_name"
),
)
if not _index_exists("config_profiles", "idx_config_profiles_user"):
op.create_index("idx_config_profiles_user", "config_profiles", ["user_id"])
# Create config_profiles table
op.create_table(
"config_profiles",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("user_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("name", sa.String(length=255), nullable=False),
sa.Column("description", sa.Text(), nullable=True),
sa.Column("created_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.Column("updated_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.ForeignKeyConstraint(["user_id"], ["users.id"], ondelete="CASCADE"),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint("user_id", "name", name="uq_config_profiles_user_name"),
)
op.create_index("idx_config_profiles_user", "config_profiles", ["user_id"])
if not _table_exists("config_includes"):
op.create_table(
"config_includes",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("profile_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column(
"included_profile_id", postgresql.UUID(as_uuid=True), nullable=False
),
sa.Column("order_index", sa.Integer(), nullable=False, server_default="0"),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.Column(
"updated_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.ForeignKeyConstraint(
["profile_id"], ["config_profiles.id"], ondelete="CASCADE"
),
sa.ForeignKeyConstraint(
["included_profile_id"],
["config_profiles.id"],
ondelete="CASCADE",
),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint(
"profile_id", "included_profile_id", name="uq_config_includes_pair"
),
)
if not _index_exists("config_includes", "idx_config_includes_profile"):
op.create_index("idx_config_includes_profile", "config_includes", ["profile_id"])
if not _index_exists("config_includes", "idx_config_includes_included"):
op.create_index(
"idx_config_includes_included", "config_includes", ["included_profile_id"]
)
# Create config_includes table
op.create_table(
"config_includes",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("profile_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("included_profile_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("order_index", sa.Integer(), nullable=False, server_default="0"),
sa.Column("created_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.Column("updated_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.ForeignKeyConstraint(["profile_id"], ["config_profiles.id"], ondelete="CASCADE"),
sa.ForeignKeyConstraint(["included_profile_id"], ["config_profiles.id"], ondelete="CASCADE"),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint("profile_id", "included_profile_id", name="uq_config_includes_pair"),
)
op.create_index("idx_config_includes_profile", "config_includes", ["profile_id"])
op.create_index("idx_config_includes_included", "config_includes", ["included_profile_id"])
if not _table_exists("config_mounts"):
op.create_table(
"config_mounts",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("profile_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("mount_path", sa.String(length=1024), nullable=False),
sa.Column("content", sa.Text(), nullable=True),
sa.Column("source_profile_id", postgresql.UUID(as_uuid=True), nullable=True),
sa.Column("order_index", sa.Integer(), nullable=False, server_default="0"),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.Column(
"updated_at",
sa.DateTime(timezone=True),
server_default=sa.text("NOW()"),
nullable=False,
),
sa.ForeignKeyConstraint(
["profile_id"], ["config_profiles.id"], ondelete="CASCADE"
),
sa.ForeignKeyConstraint(
["source_profile_id"], ["config_profiles.id"], ondelete="SET NULL"
),
sa.PrimaryKeyConstraint("id"),
)
if not _index_exists("config_mounts", "idx_config_mounts_profile"):
op.create_index("idx_config_mounts_profile", "config_mounts", ["profile_id"])
# Create config_mounts table
op.create_table(
"config_mounts",
sa.Column("id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("profile_id", postgresql.UUID(as_uuid=True), nullable=False),
sa.Column("mount_path", sa.String(length=1024), nullable=False),
sa.Column("content", sa.Text(), nullable=True),
sa.Column("source_profile_id", postgresql.UUID(as_uuid=True), nullable=True),
sa.Column("order_index", sa.Integer(), nullable=False, server_default="0"),
sa.Column("created_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.Column("updated_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.ForeignKeyConstraint(["profile_id"], ["config_profiles.id"], ondelete="CASCADE"),
sa.ForeignKeyConstraint(["source_profile_id"], ["config_profiles.id"], ondelete="SET NULL"),
sa.PrimaryKeyConstraint("id"),
)
op.create_index("idx_config_mounts_profile", "config_mounts", ["profile_id"])
if not _column_exists("tool_instances", "selected_profile_id"):
op.add_column(
"tool_instances",
sa.Column("selected_profile_id", postgresql.UUID(as_uuid=True), nullable=True),
)
if not _foreign_key_exists(
"tool_instances", ["selected_profile_id"], "config_profiles"
):
op.create_foreign_key(
"fk_tool_instances_selected_profile",
"tool_instances",
"config_profiles",
["selected_profile_id"],
["id"],
ondelete="SET NULL",
)
if not _index_exists("tool_instances", "idx_tool_instances_selected_profile"):
op.create_index(
"idx_tool_instances_selected_profile",
"tool_instances",
["selected_profile_id"],
)
# Add selected_profile_id to tool_instances
op.add_column(
"tool_instances",
sa.Column("selected_profile_id", postgresql.UUID(as_uuid=True), nullable=True),
)
op.create_foreign_key(
"fk_tool_instances_selected_profile",
"tool_instances",
"config_profiles",
["selected_profile_id"],
["id"],
ondelete="SET NULL",
)
op.create_index("idx_tool_instances_selected_profile", "tool_instances", ["selected_profile_id"])
def downgrade() -> None:
# Remove selected_profile_id from tool_instances
op.drop_index("idx_tool_instances_selected_profile", table_name="tool_instances")
op.drop_constraint(
"fk_tool_instances_selected_profile", "tool_instances", type_="foreignkey"
)
op.drop_constraint("fk_tool_instances_selected_profile", "tool_instances", type_="foreignkey")
op.drop_column("tool_instances", "selected_profile_id")
# Drop config_mounts
@@ -1,29 +0,0 @@
"""add probe_result to tool_instances
Revision ID: 0013_add_probe_result
Revises: 0012_default_port_req
Create Date: 2026-05-22 21:45:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision: str = "0013_add_probe_result"
down_revision: Union[str, None] = "0012_default_port_req"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
op.add_column(
"tool_instances",
sa.Column("probe_result", postgresql.JSON, nullable=True)
)
def downgrade() -> None:
op.drop_column("tool_instances", "probe_result")
@@ -1,180 +0,0 @@
"""add profile resolver fields to config profiles and mounts
Revision ID: 0014_add_profile_resolver_fields
Revises: 0013_add_config_profiles
Create Date: 2026-05-24 14:00:00.000000
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision: str = "0014_add_profile_resolver_fields"
down_revision: str | None = "0013_add_config_profiles"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def _table_exists(table_name: str) -> bool:
return sa.inspect(op.get_bind()).has_table(table_name)
def _column_exists(table_name: str, column_name: str) -> bool:
if not _table_exists(table_name):
return False
return column_name in {
column["name"] for column in sa.inspect(op.get_bind()).get_columns(table_name)
}
def _index_exists(table_name: str, index_name: str) -> bool:
if not _table_exists(table_name):
return False
return index_name in {
index["name"] for index in sa.inspect(op.get_bind()).get_indexes(table_name)
}
def _foreign_key_exists(
table_name: str,
constrained_columns: list[str],
referred_table: str,
) -> bool:
if not _table_exists(table_name):
return False
for foreign_key in sa.inspect(op.get_bind()).get_foreign_keys(table_name):
if (
foreign_key.get("constrained_columns") == constrained_columns
and foreign_key.get("referred_table") == referred_table
):
return True
return False
def _foreign_key_names_for_column(table_name: str, column_name: str) -> list[str]:
if not _table_exists(table_name):
return []
names: list[str] = []
for foreign_key in sa.inspect(op.get_bind()).get_foreign_keys(table_name):
if column_name in foreign_key.get("constrained_columns", []):
name = foreign_key.get("name")
if name:
names.append(name)
return names
def upgrade() -> None:
if not _column_exists("config_profiles", "project_id"):
op.add_column(
"config_profiles",
sa.Column("project_id", postgresql.UUID(as_uuid=True), nullable=True),
)
if not _column_exists("config_profiles", "tool_type_id"):
op.add_column(
"config_profiles",
sa.Column("tool_type_id", postgresql.UUID(as_uuid=True), nullable=True),
)
if not _column_exists("config_profiles", "environment_variables"):
op.add_column(
"config_profiles",
sa.Column("environment_variables", sa.JSON(), nullable=True),
)
if not _column_exists("config_profiles", "start_command"):
op.add_column(
"config_profiles",
sa.Column("start_command", sa.Text(), nullable=True),
)
if not _column_exists("config_profiles", "working_directory"):
op.add_column(
"config_profiles",
sa.Column("working_directory", sa.Text(), nullable=True),
)
if not _column_exists("config_profiles", "port"):
op.add_column("config_profiles", sa.Column("port", sa.Integer(), nullable=True))
if not _column_exists("config_profiles", "is_default"):
op.add_column(
"config_profiles",
sa.Column("is_default", sa.Boolean(), nullable=False, server_default="false"),
)
if not _foreign_key_exists("config_profiles", ["project_id"], "projects"):
op.create_foreign_key(
"fk_config_profiles_project",
"config_profiles",
"projects",
["project_id"],
["id"],
ondelete="CASCADE",
)
if not _foreign_key_exists("config_profiles", ["tool_type_id"], "tool_types"):
op.create_foreign_key(
"fk_config_profiles_tool_type",
"config_profiles",
"tool_types",
["tool_type_id"],
["id"],
ondelete="CASCADE",
)
if not _index_exists("config_profiles", "idx_config_profiles_project"):
op.create_index("idx_config_profiles_project", "config_profiles", ["project_id"])
if not _index_exists("config_profiles", "idx_config_profiles_tool_type"):
op.create_index(
"idx_config_profiles_tool_type", "config_profiles", ["tool_type_id"]
)
if _column_exists("config_mounts", "mount_path") and not _column_exists(
"config_mounts", "target_path"
):
op.alter_column("config_mounts", "mount_path", new_column_name="target_path")
if not _column_exists("config_mounts", "mode"):
op.add_column(
"config_mounts",
sa.Column("mode", sa.String(length=10), nullable=False, server_default="rw"),
)
if not _column_exists("config_mounts", "files"):
op.add_column(
"config_mounts",
sa.Column("files", sa.JSON(), nullable=True),
)
for constraint_name in _foreign_key_names_for_column(
"config_mounts", "source_profile_id"
):
op.drop_constraint(constraint_name, "config_mounts", type_="foreignkey")
if _column_exists("config_mounts", "content"):
op.drop_column("config_mounts", "content")
if _column_exists("config_mounts", "source_profile_id"):
op.drop_column("config_mounts", "source_profile_id")
def downgrade() -> None:
# Restore config_mounts
op.add_column(
"config_mounts",
sa.Column("source_profile_id", postgresql.UUID(as_uuid=True), nullable=True),
)
op.add_column(
"config_mounts",
sa.Column("content", sa.Text(), nullable=True),
)
op.drop_column("config_mounts", "files")
op.drop_column("config_mounts", "mode")
op.alter_column("config_mounts", "target_path", new_column_name="mount_path")
# Restore config_profiles
op.drop_index("idx_config_profiles_tool_type", table_name="config_profiles")
op.drop_index("idx_config_profiles_project", table_name="config_profiles")
op.drop_constraint(
"fk_config_profiles_tool_type", "config_profiles", type_="foreignkey"
)
op.drop_constraint("fk_config_profiles_project", "config_profiles", type_="foreignkey")
op.drop_column("config_profiles", "is_default")
op.drop_column("config_profiles", "port")
op.drop_column("config_profiles", "working_directory")
op.drop_column("config_profiles", "start_command")
op.drop_column("config_profiles", "environment_variables")
op.drop_column("config_profiles", "tool_type_id")
op.drop_column("config_profiles", "project_id")
@@ -1,23 +0,0 @@
"""merge migration heads
Revision ID: 0014_merge_heads
Revises: 0013_add_probe_result, 8ed7dd80973d
Create Date: 2026-05-22 21:50:00.000000
"""
from typing import Sequence, Union
# revision identifiers, used by Alembic.
revision: str = "0014_merge_heads"
down_revision: Union[str, Sequence[str], None] = ("0013_add_probe_result", "8ed7dd80973d")
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
pass
def downgrade() -> None:
pass
@@ -1,109 +0,0 @@
"""replace interfaces with interface_type and add requires_port
Revision ID: 0015_single_interface
Revises: 0014_merge_heads
Create Date: 2026-05-22 22:00:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision: str = "0015_single_interface"
down_revision: Union[str, Sequence[str], None] = "0014_merge_heads"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def _get_dialect() -> str:
"""Get the current database dialect name."""
conn = op.get_bind()
return conn.dialect.name
def upgrade() -> None:
dialect = _get_dialect()
# Add new columns
op.add_column('tool_types', sa.Column('interface_type', sa.String(20), nullable=True))
op.add_column('tool_types', sa.Column('requires_port', sa.Boolean(), nullable=False, server_default='true'))
# Migrate data: take first element from interfaces JSON array
if dialect == 'postgresql':
op.execute("""
UPDATE tool_types
SET interface_type = COALESCE(
(SELECT elem FROM jsonb_array_elements_text(interfaces::jsonb) AS elem LIMIT 1),
'web'
),
requires_port = CASE
WHEN COALESCE(
(SELECT elem FROM jsonb_array_elements_text(interfaces::jsonb) AS elem LIMIT 1),
'web'
) = 'web' THEN true
ELSE false
END
""")
else:
# SQLite: interfaces is stored as JSON text, extract first array element
op.execute("""
UPDATE tool_types
SET interface_type = COALESCE(
(SELECT json_extract(value, '$[0]')
FROM json_each(interfaces) AS value
WHERE json_valid(interfaces)
LIMIT 1),
'web'
),
requires_port = CASE
WHEN COALESCE(
(SELECT json_extract(value, '$[0]')
FROM json_each(interfaces) AS value
WHERE json_valid(interfaces)
LIMIT 1),
'web'
) = 'web' THEN true
ELSE false
END
""")
# Make interface_type non-nullable after data migration
op.alter_column('tool_types', 'interface_type', nullable=False)
# Drop old interfaces column
op.drop_column('tool_types', 'interfaces')
# Add CHECK constraint for interface_type (only on PostgreSQL; SQLite supports it too)
op.create_check_constraint('chk_interface_type', 'tool_types', sa.text("interface_type IN ('web', 'terminal')"))
def downgrade() -> None:
dialect = _get_dialect()
# Drop CHECK constraint
op.drop_constraint('chk_interface_type', 'tool_types', type_='check')
# Add back interfaces column
if dialect == 'postgresql':
op.add_column('tool_types', sa.Column('interfaces', postgresql.JSONB(astext_type=sa.Text()), nullable=False, server_default='["web"]'))
# Migrate data back: wrap interface_type in array
op.execute("""
UPDATE tool_types
SET interfaces = jsonb_build_array(interface_type)
""")
else:
op.add_column('tool_types', sa.Column('interfaces', sa.JSON(), nullable=False, server_default='["web"]'))
# Migrate data back: wrap interface_type in array for SQLite
op.execute("""
UPDATE tool_types
SET interfaces = json_array(interface_type)
""")
# Drop new columns
op.drop_column('tool_types', 'requires_port')
op.drop_column('tool_types', 'interface_type')
@@ -1,32 +0,0 @@
"""add_ssh_key_id_to_config_profiles
Revision ID: 069d3da4dc9b
Revises: 2026_05_29_add_notifications_table
Create Date: 2026-05-29 12:30:16.580532
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = "069d3da4dc9b"
down_revision = "2026_05_29_add_notifications_table"
branch_labels = None
depends_on = None
def upgrade() -> None:
op.add_column(
"config_profiles",
sa.Column(
"ssh_key_id",
sa.Uuid(),
sa.ForeignKey("ssh_keys.id", ondelete="SET NULL"),
nullable=True,
),
)
def downgrade() -> None:
op.drop_column("config_profiles", "ssh_key_id")
@@ -1,129 +0,0 @@
"""add pi agent tool type
Revision ID: 20260527_160017_add_pi_agent
Revises: f3d2dc90ba3a
Create Date: 2026-05-27T16:00:17
"""
import json
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
import uuid
# revision identifiers, used by Alembic.
revision: str = "20260527_160017_add_pi_agent"
down_revision: Union[str, None] = "2026_05_27_external_repos"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
PI_AGENT_ID = uuid.UUID("d07b8376-2151-4119-8c1d-27f792aae9a3")
def upgrade() -> None:
# Check if pi-agent already exists
conn = op.get_bind()
result = conn.execute(
sa.text("SELECT id FROM tool_types WHERE name = 'pi-agent'")
).fetchone()
if result is None:
conn.execute(
sa.text("""
INSERT INTO tool_types (
id, name, display_name, description, category,
interface_type, requires_port, default_port,
definition_type, compose_template, dockerfile_template, required_variables,
created_at, updated_at
) VALUES (
:id, :name, :display_name, :description, :category,
:interface_type, :requires_port, :default_port,
:definition_type, :compose_template, :dockerfile_template, :required_variables,
now(), now()
)
"""),
{
"id": PI_AGENT_ID,
"name": "pi-agent",
"display_name": "Pi Agent",
"description": "Pi coding agent terminal environment with nvim, ranger, and tmux",
"category": "development",
"interface_type": "terminal",
"requires_port": False,
"default_port": 0,
"definition_type": "dockerfile",
"compose_template": """services:
app:
build: .
stdin_open: true
tty: true
volumes:
- ${REPO_PATH}:/workspace
working_dir: /workspace
command: /bin/bash""",
"dockerfile_template": """# Pi Coding Agent - Terminal-based coding harness
FROM ubuntu:24.04
ENV DEBIAN_FRONTEND=noninteractive
# Install base dependencies
RUN apt-get update && apt-get install -y \\
curl \\
wget \\
git \\
neovim \\
ranger \\
tmux \\
htop \\
tree \\
jq \\
ca-certificates \\
python3 \\
python3-pip \\
build-essential \\
&& rm -rf /var/lib/apt/lists/*
# Install Node.js (required for Pi)
RUN curl -fsSL https://deb.nodesource.com/setup_20.x | bash - \\
&& apt-get install -y nodejs \\
&& rm -rf /var/lib/apt/lists/*
# Install Pi Coding Agent globally
RUN npm install -g --ignore-scripts @earendil-works/pi-coding-agent
# Create non-root user
RUN useradd -m -s /bin/bash user
WORKDIR /home/user
# Set up git
RUN git config --global init.defaultBranch main \\
&& git config --global user.email "dev@headquarter.local" \\
&& git config --global user.name "Developer"
# Create default tmux config
RUN echo 'set -g mouse on\\nset -g default-terminal "screen-256color"' > /home/user/.tmux.conf
# Create default ranger config
RUN mkdir -p /home/user/.config/ranger \\
&& echo 'set preview_files true\\nset use_preview_script true' > /home/user/.config/ranger/rc.conf
# Set up Pi config directory
RUN mkdir -p /home/user/.pi/agent
USER user
# Default to bash (Pi is invoked manually via `pi` command)
CMD ["/bin/bash"]""",
"required_variables": json.dumps(["REPO_PATH"]),
}
)
def downgrade() -> None:
conn = op.get_bind()
conn.execute(
sa.text("DELETE FROM tool_types WHERE name = 'pi-agent'")
)
@@ -1,36 +0,0 @@
"""add_clone_mode_and_ssh_key_id
Revision ID: 2026_05_22_add_clone_mode
Revises: 0014_merge_heads
Create Date: 2026-05-22 20:30:00.000000
"""
from alembic import op
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision = '2026_05_22_add_clone_mode'
down_revision = '0015_single_interface'
branch_labels = None
depends_on = None
def upgrade() -> None:
# Add ssh_key_id to git_repositories
op.add_column('git_repositories', sa.Column('ssh_key_id', postgresql.UUID(), nullable=True))
op.create_foreign_key('fk_git_repositories_ssh_key', 'git_repositories', 'ssh_keys', ['ssh_key_id'], ['id'])
# Add clone_mode and branch to tool_instances
op.add_column('tool_instances', sa.Column('clone_mode', sa.String(20), nullable=False, server_default='mount'))
op.add_column('tool_instances', sa.Column('branch', sa.String(255), nullable=True, server_default='main'))
def downgrade() -> None:
# Drop columns from tool_instances
op.drop_column('tool_instances', 'branch')
op.drop_column('tool_instances', 'clone_mode')
# Drop ssh_key_id from git_repositories
op.drop_constraint('fk_git_repositories_ssh_key', 'git_repositories', type_='foreignkey')
op.drop_column('git_repositories', 'ssh_key_id')
@@ -1,25 +0,0 @@
"""remove_is_builtin_from_tool_types
Revision ID: 2026_05_23_remove_is_builtin
Revises: 2026_05_22_add_clone_mode
Create Date: 2026-05-23 14:30:00.000000
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = '2026_05_23_remove_is_builtin'
down_revision = 'f3d2dc90ba3a'
branch_labels = None
depends_on = None
def upgrade() -> None:
# Drop the is_builtin column from tool_types
op.execute("ALTER TABLE tool_types DROP COLUMN IF EXISTS is_builtin")
def downgrade() -> None:
# Add the is_builtin column back to tool_types
op.add_column('tool_types', sa.Column('is_builtin', sa.Boolean(), nullable=False, server_default='false'))
@@ -1,30 +0,0 @@
"""add startup_command to tool_types
Revision ID: 2026_05_24_220141
Revises: 6fc7bfcf199f
Create Date: 2026-05-24 22:01:41.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_24_220141"
down_revision: Union[str, Sequence[str], None] = "6fc7bfcf199f"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
op.add_column(
"tool_types",
sa.Column("startup_command", sa.Text(), nullable=True),
)
def downgrade() -> None:
op.drop_column("tool_types", "startup_command")
@@ -1,86 +0,0 @@
"""add_config_profiles
Revision ID: 2026_05_24_add_config_profiles
Revises: f3d2dc90ba3a
Create Date: 2026-05-24 14:00:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
# revision identifiers, used by Alembic.
revision: str = "2026_05_24_add_config_profiles"
down_revision: Union[str, Sequence[str], None] = "f3d2dc90ba3a"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
# Create config_profiles table
op.create_table(
"config_profiles",
sa.Column("id", postgresql.UUID(as_uuid=True), server_default=sa.text("gen_random_uuid()"), nullable=False),
sa.Column("user_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("users.id", ondelete="CASCADE"), nullable=False),
sa.Column("name", sa.String(255), nullable=False),
sa.Column("description", sa.Text(), nullable=True),
sa.Column("project_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("projects.id", ondelete="CASCADE"), nullable=True),
sa.Column("tool_type_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("tool_types.id", ondelete="CASCADE"), nullable=True),
sa.Column("env_vars", postgresql.JSONB(astext_type=sa.Text()), nullable=False, server_default="{}"),
sa.Column("runtime_hints", postgresql.JSONB(astext_type=sa.Text()), nullable=False, server_default="{}"),
sa.Column("mounts", postgresql.JSONB(astext_type=sa.Text()), nullable=False, server_default="[]"),
sa.Column("files", postgresql.JSONB(astext_type=sa.Text()), nullable=False, server_default="{}"),
sa.Column("is_default", sa.Boolean(), nullable=False, server_default="false"),
sa.Column("created_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.Column("updated_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint("user_id", "name", name="uq_config_profiles_user_name"),
)
# Create indexes for config_profiles
op.create_index("idx_config_profiles_user", "config_profiles", ["user_id"])
op.create_index("idx_config_profiles_project", "config_profiles", ["project_id"])
op.create_index("idx_config_profiles_tool_type", "config_profiles", ["tool_type_id"])
# Create config_profile_includes table
op.create_table(
"config_profile_includes",
sa.Column("id", postgresql.UUID(as_uuid=True), server_default=sa.text("gen_random_uuid()"), nullable=False),
sa.Column("profile_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("config_profiles.id", ondelete="CASCADE"), nullable=False),
sa.Column("included_profile_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("config_profiles.id", ondelete="CASCADE"), nullable=False),
sa.Column("order_index", sa.Integer(), nullable=False, server_default="0"),
sa.Column("created_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.Column("updated_at", sa.DateTime(timezone=True), server_default=sa.text("NOW()"), nullable=False),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint("profile_id", "included_profile_id", name="uq_config_profile_includes"),
)
# Create indexes for config_profile_includes
op.create_index("idx_config_profile_includes_profile", "config_profile_includes", ["profile_id"])
op.create_index("idx_config_profile_includes_included", "config_profile_includes", ["included_profile_id"])
# Add selected_config_profile_id to tool_instances
op.add_column(
"tool_instances",
sa.Column("selected_config_profile_id", postgresql.UUID(as_uuid=True), sa.ForeignKey("config_profiles.id", ondelete="SET NULL"), nullable=True),
)
op.create_index("idx_tool_instances_config_profile", "tool_instances", ["selected_config_profile_id"])
def downgrade() -> None:
# Remove selected_config_profile_id from tool_instances
op.drop_index("idx_tool_instances_config_profile", table_name="tool_instances")
op.drop_column("tool_instances", "selected_config_profile_id")
# Drop config_profile_includes table
op.drop_index("idx_config_profile_includes_included", table_name="config_profile_includes")
op.drop_index("idx_config_profile_includes_profile", table_name="config_profile_includes")
op.drop_table("config_profile_includes")
# Drop config_profiles table
op.drop_index("idx_config_profiles_tool_type", table_name="config_profiles")
op.drop_index("idx_config_profiles_project", table_name="config_profiles")
op.drop_index("idx_config_profiles_user", table_name="config_profiles")
op.drop_table("config_profiles")
@@ -1,28 +0,0 @@
"""add_git_mounts_to_config_profiles
Revision ID: 2026_05_26_add_git_mounts
Revises: f3d2dc90ba3a
Create Date: 2026-05-26 12:00:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_26_add_git_mounts"
down_revision: Union[str, Sequence[str], None] = "2026_05_24_220141"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
op.add_column(
"config_profiles",
sa.Column("git_mounts", sa.JSON(), nullable=True, default=list),
)
def downgrade() -> None:
op.drop_column("config_profiles", "git_mounts")
@@ -1,41 +0,0 @@
"""make_project_id_nullable_in_git_repositories
Revision ID: 2026_05_27_external_repos
Revises: 2026_05_26_add_git_mounts
Create Date: 2026-05-27 08:30:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_27_external_repos"
down_revision: Union[str, Sequence[str], None] = "2026_05_26_add_git_mounts"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
# Expand alembic_version version_num to avoid truncation errors
op.execute("ALTER TABLE alembic_version ALTER COLUMN version_num TYPE VARCHAR(64)")
# Make project_id nullable to allow external repositories
op.alter_column(
"git_repositories",
"project_id",
existing_type=sa.UUID(),
nullable=True,
)
def downgrade() -> None:
op.alter_column(
"git_repositories",
"project_id",
existing_type=sa.UUID(),
nullable=False,
)
op.execute("ALTER TABLE alembic_version ALTER COLUMN version_num TYPE VARCHAR(32)")
@@ -1,122 +0,0 @@
"""add monitoring tables
Revision ID: 2026_05_28_add_monitoring_tables
Revises: 2026_05_28_drop_tool_configs_and_config_folders
Create Date: 2026-05-28
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_28_add_monitoring_tables"
down_revision: str | None = "2026_05_28_drop_tool_configs_and_config_folders"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def upgrade() -> None:
op.create_table(
"instance_events",
sa.Column("id", sa.Uuid(), nullable=False),
sa.Column(
"instance_id",
sa.Uuid(),
nullable=False,
),
sa.Column("event_type", sa.String(length=50), nullable=False),
sa.Column("status", sa.String(length=50), nullable=True),
sa.Column("message", sa.Text(), nullable=True),
sa.Column("created_by", sa.Uuid(), nullable=True),
sa.Column(
"metadata",
sa.JSON(),
nullable=False,
server_default="{}",
),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.func.now(),
nullable=False,
),
sa.ForeignKeyConstraint(
["instance_id"],
["tool_instances.id"],
ondelete="CASCADE",
),
sa.ForeignKeyConstraint(
["created_by"],
["users.id"],
ondelete="SET NULL",
),
sa.PrimaryKeyConstraint("id"),
)
op.create_index(
"idx_instance_events_instance_id",
"instance_events",
["instance_id"],
)
op.create_index(
"idx_instance_events_created_at",
"instance_events",
["created_at"],
postgresql_using="btree",
)
op.create_index(
"idx_instance_events_event_type",
"instance_events",
["event_type"],
)
op.create_table(
"health_checks",
sa.Column("id", sa.Uuid(), nullable=False),
sa.Column(
"instance_id",
sa.Uuid(),
nullable=False,
),
sa.Column("container_status", sa.String(length=50), nullable=True),
sa.Column("container_healthy", sa.Boolean(), nullable=True),
sa.Column("tunnel_healthy", sa.Boolean(), nullable=True),
sa.Column("exit_code", sa.Integer(), nullable=True),
sa.Column("probe_status", sa.String(length=50), nullable=True),
sa.Column("probe_output", sa.Text(), nullable=True),
sa.Column(
"checked_at",
sa.DateTime(timezone=True),
server_default=sa.func.now(),
nullable=False,
),
sa.ForeignKeyConstraint(
["instance_id"],
["tool_instances.id"],
ondelete="CASCADE",
),
sa.PrimaryKeyConstraint("id"),
)
op.create_index(
"idx_health_checks_instance_id",
"health_checks",
["instance_id"],
)
op.create_index(
"idx_health_checks_checked_at",
"health_checks",
["checked_at"],
postgresql_using="btree",
)
def downgrade() -> None:
op.drop_index("idx_health_checks_checked_at", table_name="health_checks")
op.drop_index("idx_health_checks_instance_id", table_name="health_checks")
op.drop_table("health_checks")
op.drop_index("idx_instance_events_event_type", table_name="instance_events")
op.drop_index("idx_instance_events_created_at", table_name="instance_events")
op.drop_index("idx_instance_events_instance_id", table_name="instance_events")
op.drop_table("instance_events")
@@ -1,61 +0,0 @@
"""add terminal_sessions table
Revision ID: 2026_05_28_add_terminal_sessions
Revises: 20260527_160017_add_pi_agent
Create Date: 2026-05-28
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_28_add_terminal_sessions"
down_revision: str | None = "2026_05_28_add_tool_definition_manifests"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def upgrade() -> None:
op.create_table(
"terminal_sessions",
sa.Column("id", sa.UUID(), nullable=False),
sa.Column("instance_id", sa.UUID(), nullable=False),
sa.Column("name", sa.String(length=255), nullable=True),
sa.Column("status", sa.String(length=50), nullable=False),
sa.Column("last_activity_at", sa.DateTime(timezone=True), nullable=True),
sa.Column("closed_at", sa.DateTime(timezone=True), nullable=True),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.text("now()"),
nullable=False,
),
sa.Column(
"updated_at",
sa.DateTime(timezone=True),
server_default=sa.text("now()"),
onupdate=sa.text("now()"),
nullable=False,
),
sa.ForeignKeyConstraint(
["instance_id"], ["tool_instances.id"], ondelete="CASCADE"
),
sa.PrimaryKeyConstraint("id"),
)
op.create_index(
op.f("ix_terminal_sessions_instance_id"),
"terminal_sessions",
["instance_id"],
unique=False,
)
def downgrade() -> None:
op.drop_index(
op.f("ix_terminal_sessions_instance_id"),
table_name="terminal_sessions",
)
op.drop_table("terminal_sessions")
@@ -1,359 +0,0 @@
"""add tool definition manifests
Revision ID: 2026_05_28_add_tool_definition_manifests
Revises: 20260527_160017_add_pi_agent
Create Date: 2026-05-28T11:00:00
"""
import json
import uuid
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_28_add_tool_definition_manifests"
down_revision: Union[str, None] = "20260527_160017_add_pi_agent"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
BASE_UBUNTU_ID = uuid.UUID("a1b2c3d4-e5f6-7890-abcd-ef1234567890")
PI_AGENT_MANIFEST_ID = uuid.UUID("d07b8376-2151-4119-8c1d-27f792aae9a3")
def upgrade() -> None:
conn = op.get_bind()
# ── Create tool_definition_manifests table ───────────────────────
op.create_table(
"tool_definition_manifests",
sa.Column("id", sa.UUID(), nullable=False),
sa.Column("name", sa.String(64), nullable=False),
sa.Column("display_name", sa.String(128), nullable=False),
sa.Column("description", sa.Text(), nullable=True),
sa.Column("category", sa.String(64), nullable=True),
sa.Column("interface_type", sa.String(16), nullable=False),
sa.Column("base_image", sa.String(256), nullable=True),
sa.Column("base_definition_id", sa.UUID(), nullable=True),
sa.Column(
"base_version", sa.String(32), nullable=False, server_default="latest"
),
sa.Column("manifest", sa.JSON(), nullable=False),
sa.Column("dockerfile_cache", sa.Text(), nullable=True),
sa.Column("compose_cache", sa.Text(), nullable=True),
sa.Column("version", sa.String(32), nullable=False, server_default="v1"),
sa.Column("is_base", sa.Boolean(), nullable=False, server_default="false"),
sa.Column("created_by_id", sa.UUID(), nullable=True),
sa.Column(
"created_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.Column(
"updated_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.PrimaryKeyConstraint("id"),
sa.UniqueConstraint("name"),
sa.ForeignKeyConstraint(
["base_definition_id"], ["tool_definition_manifests.id"]
),
sa.ForeignKeyConstraint(["created_by_id"], ["users.id"]),
sa.CheckConstraint(
"(base_image IS NOT NULL) OR (base_definition_id IS NOT NULL)",
name="ck_tool_definition_manifests_base_required",
),
)
# ── Add columns to tool_types ────────────────────────────────────
# Check if manifest_id exists before adding
conn = op.get_bind()
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_types' AND column_name = 'manifest_id'
""")
)
if not result.fetchone():
op.add_column("tool_types", sa.Column("manifest_id", sa.UUID(), nullable=True))
op.create_foreign_key(
"fk_tool_types_manifest_id",
"tool_types",
"tool_definition_manifests",
["manifest_id"],
["id"],
)
# Update definition_type to allow 'legacy' and 'manifest'
result = conn.execute(
sa.text("""
SELECT constraint_name FROM information_schema.check_constraints
WHERE constraint_name = 'chk_definition_type'
""")
)
if result.fetchone():
op.drop_constraint("chk_definition_type", "tool_types", type_="check")
op.execute("ALTER TABLE tool_types ALTER COLUMN definition_type TYPE VARCHAR(16)")
op.execute(
"ALTER TABLE tool_types ALTER COLUMN definition_type SET DEFAULT 'legacy'"
)
# ── Add columns to tool_instances ────────────────────────────────
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_instances' AND column_name = 'manifest_compiled_at'
""")
)
if not result.fetchone():
op.add_column(
"tool_instances",
sa.Column(
"manifest_compiled_at", sa.TIMESTAMP(timezone=True), nullable=True
),
)
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_instances' AND column_name = 'image_tag'
""")
)
if not result.fetchone():
op.add_column(
"tool_instances",
sa.Column("image_tag", sa.String(256), nullable=True),
)
# ── Data migration: create base definition + pi-agent manifest ───
conn.execute(
sa.text(
"""
INSERT INTO tool_definition_manifests
(id, name, display_name, description, interface_type, base_image,
manifest, is_base, version, created_at, updated_at)
VALUES
(:base_id, 'ubuntu-24.04-dev', 'Ubuntu 24.04 Dev Base',
'Base development environment with build tools', 'terminal',
'ubuntu:24.04', :base_manifest, true, 'v1', now(), now())
"""
),
{
"base_id": BASE_UBUNTU_ID,
"base_manifest": json.dumps(
{
"name": "ubuntu-24.04-dev",
"display_name": "Ubuntu 24.04 Dev Base",
"interface_type": "terminal",
"base_image": "ubuntu:24.04",
"packages": {
"apt": [
"curl",
"wget",
"git",
"build-essential",
"ca-certificates",
"python3",
"python3-pip",
]
},
"user": {
"name": "user",
"uid": 1000,
"gid": 1000,
"create_home": True,
"shell": "/bin/bash",
},
"env": {"DEBIAN_FRONTEND": "noninteractive"},
}
),
},
)
conn.execute(
sa.text(
"""
INSERT INTO tool_definition_manifests
(id, name, display_name, description, category, interface_type,
base_definition_id, base_version, manifest, version, created_at, updated_at)
VALUES
(:manifest_id, 'pi-agent', 'Pi Agent',
'Terminal-based coding harness with nvim, ranger, tmux',
'development', 'terminal', :base_id, 'v1', :manifest, 'v1',
now(), now())
"""
),
{
"manifest_id": PI_AGENT_MANIFEST_ID,
"base_id": BASE_UBUNTU_ID,
"manifest": json.dumps(
{
"name": "pi-agent",
"display_name": "Pi Agent",
"description": "Terminal-based coding harness",
"category": "development",
"interface_type": "terminal",
"base_definition_id": str(BASE_UBUNTU_ID),
"base_version": "v1",
"packages": {
"apt": [
"neovim",
"ranger",
"tmux",
"htop",
"tree",
"jq",
],
"node": {"version": "20"},
"npm_global": ["@earendil-works/pi-coding-agent"],
},
"user": {
"name": "user",
"uid": 1001,
"gid": 1001,
"create_home": True,
"shell": "/bin/bash",
},
"env": {"DEBIAN_FRONTEND": "noninteractive"},
"scripts": {
"build": [
"git config --global init.defaultBranch main && git config --global user.email 'dev@headquarter.local' && git config --global user.name 'Developer'",
"mkdir -p /home/user/.config/ranger && echo 'set preview_files true' > /home/user/.config/ranger/rc.conf",
],
"startup": [
"if [ -d /workspace ]; then sudo chown -R user:user /workspace 2>/dev/null || true; fi",
],
},
"mounts": [
{
"name": "workspace",
"target": "/workspace",
"source_type": "repo",
"writable": True,
"owner": "user",
},
],
"runtime": {
"command": ["/bin/bash"],
"stdin_open": True,
"tty": True,
"working_dir": "/workspace",
},
}
),
},
)
# ── Update existing pi-agent tool_type ───────────────────────────
conn.execute(
sa.text(
"""
UPDATE tool_types
SET manifest_id = :manifest_id,
definition_type = 'manifest',
dockerfile_template = NULL,
compose_template = NULL
WHERE name = 'pi-agent'
"""
),
{"manifest_id": PI_AGENT_MANIFEST_ID},
)
def downgrade() -> None:
conn = op.get_bind()
# Restore pi-agent templates if manifest_id column exists
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_types' AND column_name = 'manifest_id'
""")
)
has_manifest_id = result.fetchone() is not None
if has_manifest_id:
conn.execute(
sa.text(
"""
UPDATE tool_types
SET manifest_id = NULL,
definition_type = 'dockerfile',
dockerfile_template = :dockerfile,
compose_template = :compose
WHERE name = 'pi-agent'
"""
),
{
"dockerfile": """# Pi Coding Agent - Terminal-based coding harness
FROM ubuntu:24.04
ENV DEBIAN_FRONTEND=noninteractive
RUN apt-get update && apt-get install -y \\
curl wget git neovim ranger tmux htop tree jq \\
ca-certificates python3 python3-pip build-essential \\
&& rm -rf /var/lib/apt/lists/*
RUN curl -fsSL https://deb.nodesource.com/setup_20.x | bash - \\
&& apt-get install -y nodejs \\
&& rm -rf /var/lib/apt/lists/*
RUN npm install -g --ignore-scripts @earendil-works/pi-coding-agent
RUN useradd -m -s /bin/bash user
WORKDIR /home/user
RUN git config --global init.defaultBranch main \\
&& git config --global user.email "dev@headquarter.local" \\
&& git config --global user.name "Developer"
RUN echo 'set -g mouse on\\nset -g default-terminal "screen-256color"' > /home/user/.tmux.conf
RUN mkdir -p /home/user/.config/ranger \\
&& echo 'set preview_files true\\nset use_preview_script true' > /home/user/.config/ranger/rc.conf
RUN mkdir -p /home/user/.pi/agent
USER user
CMD ["/bin/bash"]
""",
"compose": """services:
app:
build: .
stdin_open: true
tty: true
volumes:
- ${REPO_PATH}:/workspace
working_dir: /workspace
command: /bin/bash""",
},
)
# Drop columns conditionally
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_instances' AND column_name = 'image_tag'
""")
)
if result.fetchone():
op.drop_column("tool_instances", "image_tag")
result = conn.execute(
sa.text("""
SELECT column_name FROM information_schema.columns
WHERE table_name = 'tool_instances' AND column_name = 'manifest_compiled_at'
""")
)
if result.fetchone():
op.drop_column("tool_instances", "manifest_compiled_at")
if has_manifest_id:
op.drop_constraint(
"fk_tool_types_manifest_id", "tool_types", type_="foreignkey"
)
op.drop_column("tool_types", "manifest_id")
op.drop_table("tool_definition_manifests")
@@ -1,89 +0,0 @@
"""drop tool_configs and config_folders tables
Revision ID: 2026_05_28_drop_tool_configs_and_config_folders
Revises: 2026_05_28_add_tool_definition_manifests
Create Date: 2026-05-28
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_28_drop_tool_configs_and_config_folders"
down_revision: Union[str, None] = "2026_05_28_add_terminal_sessions"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
conn = op.get_bind()
# Drop tool_configs table if it exists
result = conn.execute(
sa.text("""
SELECT table_name FROM information_schema.tables
WHERE table_name = 'tool_configs'
""")
)
if result.fetchone():
op.drop_table("tool_configs")
# Drop config_folders table if it exists
result = conn.execute(
sa.text("""
SELECT table_name FROM information_schema.tables
WHERE table_name = 'config_folders'
""")
)
if result.fetchone():
op.drop_table("config_folders")
def downgrade() -> None:
# Recreate config_folders table
op.create_table(
"config_folders",
sa.Column("id", sa.UUID(), nullable=False),
sa.Column("user_id", sa.UUID(), nullable=False),
sa.Column("name", sa.String(255), nullable=False),
sa.Column("description", sa.Text(), nullable=True),
sa.Column("mount_path", sa.String(1024), nullable=False),
sa.Column("files", sa.JSON(), default=dict, nullable=False),
sa.Column("project_overrides", sa.JSON(), default=dict, nullable=True),
sa.Column("is_active", sa.Boolean(), default=True, nullable=False),
sa.Column(
"created_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.Column(
"updated_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.PrimaryKeyConstraint("id"),
)
# Recreate tool_configs table
op.create_table(
"tool_configs",
sa.Column("id", sa.UUID(), nullable=False),
sa.Column("user_id", sa.UUID(), nullable=False),
sa.Column("tool_type_id", sa.UUID(), nullable=False),
sa.Column("project_id", sa.UUID(), nullable=True),
sa.Column("key", sa.String(255), nullable=False),
sa.Column("value", sa.Text(), nullable=False),
sa.Column("config_type", sa.String(20), default="env", nullable=False),
sa.Column("file_path", sa.String(1024), nullable=True),
sa.Column("port_override", sa.Integer(), nullable=True),
sa.Column("start_command", sa.Text(), nullable=True),
sa.Column("working_directory", sa.Text(), nullable=True),
sa.Column("environment_variables", sa.JSON(), default=dict, nullable=True),
sa.Column("volumes", sa.JSON(), default=list, nullable=True),
sa.Column(
"created_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.Column(
"updated_at", sa.TIMESTAMP(timezone=True), server_default=sa.func.now()
),
sa.PrimaryKeyConstraint("id"),
)
@@ -1,69 +0,0 @@
"""add notifications table
Revision ID: 2026_05_29_add_notifications_table
Revises: 2026_05_28_add_monitoring_tables
Create Date: 2026-05-29
"""
from collections.abc import Sequence
import sqlalchemy as sa
from alembic import op
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_add_notifications_table"
down_revision: str | None = "2026_05_28_add_monitoring_tables"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def upgrade() -> None:
op.create_table(
"notifications",
sa.Column("id", sa.Uuid(), nullable=False),
sa.Column("user_id", sa.Uuid(), nullable=False),
sa.Column("category", sa.String(length=32), nullable=False),
sa.Column("severity", sa.String(length=16), nullable=False),
sa.Column("title", sa.String(length=255), nullable=False),
sa.Column("message", sa.Text(), nullable=True),
sa.Column("source_type", sa.String(length=64), nullable=True),
sa.Column("source_id", sa.Uuid(), nullable=True),
sa.Column(
"metadata",
sa.JSON(),
nullable=False,
server_default="{}",
),
sa.Column("read_at", sa.DateTime(timezone=True), nullable=True),
sa.Column("dismissed_at", sa.DateTime(timezone=True), nullable=True),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.func.now(),
nullable=False,
),
sa.ForeignKeyConstraint(
["user_id"],
["users.id"],
ondelete="CASCADE",
),
sa.PrimaryKeyConstraint("id"),
)
op.create_index(
"idx_notifications_user_created_at",
"notifications",
["user_id", sa.text("created_at DESC")],
)
op.create_index(
"idx_notifications_user_unread",
"notifications",
["user_id", "read_at"],
postgresql_where=sa.text("read_at IS NULL"),
)
def downgrade() -> None:
op.drop_index("idx_notifications_user_unread", table_name="notifications")
op.drop_index("idx_notifications_user_created_at", table_name="notifications")
op.drop_table("notifications")
@@ -1,27 +0,0 @@
"""add_ssh_key_ids_to_tool_instances
Revision ID: 2026_05_29_add_ssh_key_ids_to_tool_instances
Revises: 2026_05_29_drop_ssh_key_id_from_config_profiles
Create Date: 2026-05-29 12:46:00.000000
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = "2026_05_29_add_ssh_key_ids_to_tool_instances"
down_revision = "2026_05_29_drop_ssh_key_id_from_config_profiles"
branch_labels = None
depends_on = None
def upgrade() -> None:
op.add_column(
"tool_instances",
sa.Column("ssh_key_ids", sa.JSON(), nullable=True),
)
def downgrade() -> None:
op.drop_column("tool_instances", "ssh_key_ids")
@@ -1,32 +0,0 @@
"""drop_ssh_key_id_from_config_profiles
Revision ID: 2026_05_29_drop_ssh_key_id_from_config_profiles
Revises: 069d3da4dc9b
Create Date: 2026-05-29 12:45:00.000000
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = "2026_05_29_drop_ssh_key_id_from_config_profiles"
down_revision = "069d3da4dc9b"
branch_labels = None
depends_on = None
def upgrade() -> None:
op.drop_column("config_profiles", "ssh_key_id")
def downgrade() -> None:
op.add_column(
"config_profiles",
sa.Column(
"ssh_key_id",
sa.Uuid(),
sa.ForeignKey("ssh_keys.id", ondelete="SET NULL"),
nullable=True,
),
)
@@ -1,54 +0,0 @@
"""fix code-server bind-addr to host in DB template
Revision ID: 2026_05_29_fix_code_server_bind_addr
Revises: 2026_05_29_fix_web_tool_bind_address
Create Date: 2026-05-29 15:00:00.000000
"""
from typing import Sequence
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_fix_code_server_bind_addr"
down_revision: str | None = "2026_05_29_fix_web_tool_bind_address"
branch_labels: Sequence[str] | None = None
depends_on: Sequence[str] | None = None
def upgrade() -> None:
conn = op.get_bind()
# Find code-server tool types with broken --bind-addr in compose template
result = conn.execute(
sa.text("""
SELECT id, compose_template
FROM tool_types
WHERE name = 'code-server'
AND compose_template LIKE '%--bind-addr%'
""")
).fetchall()
for tool_id, compose_template in result:
updated = compose_template.replace(
"--bind-addr 0.0.0.0:8443", "--host 0.0.0.0"
).replace("--bind-addr", "--host 0.0.0.0")
conn.execute(
sa.text("""
UPDATE tool_types
SET compose_template = :compose_template
WHERE id = :id
"""),
{"compose_template": updated, "id": tool_id},
)
print(
f"Fixed code-server template ({tool_id}): replaced --bind-addr with --host"
)
def downgrade() -> None:
pass
@@ -1,148 +0,0 @@
"""Fix code-server bind address to include port
Revision ID: 2026_05_29_fix_code_server_bind_addr_port
Revises: 2026_05_29_remove_lsio_command_override
Create Date: 2026-05-29 18:00:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
import yaml
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_fix_code_server_bind_addr_port"
down_revision: Union[str, None] = "2026_05_29_remove_lsio_command_override"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def _fix_tool_type_templates(conn) -> None:
"""Fix code-server tool type templates with broken --host override."""
result = conn.execute(
sa.text("""
SELECT id, compose_template, default_port
FROM tool_types
WHERE name = 'code-server'
AND compose_template LIKE '%--host%'
""")
).fetchall()
for tool_id, compose_template, default_port in result:
port = default_port or 8443
expected = f"--bind-addr 0.0.0.0:{port}"
# Replace any line containing --host with the correct bind-addr
lines = compose_template.split("\n")
new_lines = []
modified = False
for line in lines:
if "command:" in line and "--host" in line:
indent = line[: len(line) - len(line.lstrip())]
new_lines.append(f"{indent}command: {expected}")
modified = True
else:
new_lines.append(line)
if not modified:
continue
updated = "\n".join(new_lines)
conn.execute(
sa.text("""
UPDATE tool_types
SET compose_template = :compose_template
WHERE id = :id
"""),
{"compose_template": updated, "id": tool_id},
)
print(f"Fixed code-server template ({tool_id}): replaced --host with {expected}")
def _fix_instance_compose_files(conn) -> None:
"""Fix existing instance compose files on disk with broken --host override."""
from pathlib import Path
# Use information_schema to check if compose_path column exists
col_result = conn.execute(
sa.text("""
SELECT column_name
FROM information_schema.columns
WHERE table_name = 'tool_instances'
AND column_name = 'compose_path'
""")
).fetchone()
if not col_result:
print("compose_path column not found, skipping instance file fixes")
return
result = conn.execute(
sa.text("""
SELECT id, compose_path, tool_type_id
FROM tool_instances
WHERE compose_path IS NOT NULL
""")
).fetchall()
for instance_id, compose_path, tool_type_id in result:
path = Path(compose_path)
if not path.exists():
continue
try:
content = path.read_text()
except Exception:
continue
if "--host" not in content:
continue
# Get default_port from tool_type
port_result = conn.execute(
sa.text("""
SELECT default_port FROM tool_types WHERE id = :id
"""),
{"id": tool_type_id},
).fetchone()
port = port_result[0] if port_result and port_result[0] else 8443
expected = f"--bind-addr 0.0.0.0:{port}"
try:
data = yaml.safe_load(content)
except Exception:
continue
if not data or "services" not in data:
continue
modified = False
for svc in data["services"].values():
if "command" in svc:
cmd = svc["command"]
if "--host" in cmd:
svc["command"] = expected
modified = True
if not modified:
continue
try:
path.write_text(yaml.dump(data, default_flow_style=False))
print(
f"Fixed code-server instance compose ({instance_id}): "
f"replaced --host with {expected}"
)
except Exception as exc:
print(f"Failed to fix instance {instance_id}: {exc}")
def upgrade() -> None:
conn = op.get_bind()
_fix_tool_type_templates(conn)
_fix_instance_compose_files(conn)
def downgrade() -> None:
pass
@@ -1,140 +0,0 @@
"""fix web tool bind address to 0.0.0.0
Revision ID: 2026_05_29_fix_web_tool_bind_address
Revises: 2026_05_29_remove_ssh_keys_mount_from_manifest
Create Date: 2026-05-29 14:00:00.000000
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_fix_web_tool_bind_address"
down_revision: Union[str, None] = "2026_05_29_remove_ssh_keys_mount_from_manifest"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def _fix_code_server_compose(conn) -> None:
"""Update code-server compose template to bind to 0.0.0.0."""
result = conn.execute(
sa.text("""
SELECT id, compose_template, definition_type
FROM tool_types
WHERE name = 'code-server'
""")
).fetchone()
if result is None:
return
tool_id, compose_template, definition_type = result
if definition_type != "compose" or not compose_template:
return
# Fix or add command to bind to 0.0.0.0
lines = compose_template.split("\n")
new_lines = []
image_line_idx = -1
command_fixed = False
for i, line in enumerate(lines):
# Replace broken --bind-addr with correct --host
if "command:" in line and "--bind-addr" in line:
indent = line[: len(line) - len(line.lstrip())]
new_lines.append(f"{indent}command: --host 0.0.0.0")
command_fixed = True
continue
new_lines.append(line)
if "image:" in line and image_line_idx == -1:
image_line_idx = i
# If no command line exists, insert one after image
if not command_fixed and image_line_idx != -1:
image_line = lines[image_line_idx]
indent = image_line[: len(image_line) - len(image_line.lstrip())]
# Insert after the image line in new_lines
insert_idx = new_lines.index(image_line) + 1
new_lines.insert(insert_idx, f"{indent}command: --host 0.0.0.0")
command_fixed = True
if not command_fixed:
return
updated_compose = "\n".join(new_lines)
conn.execute(
sa.text("""
UPDATE tool_types
SET compose_template = :compose_template
WHERE id = :id
"""),
{"compose_template": updated_compose, "id": tool_id},
)
print(f"Updated code-server tool type ({tool_id}) to bind to 0.0.0.0")
def _fix_jupyter_compose(conn) -> None:
"""Update jupyter-notebook compose template to bind to 0.0.0.0."""
result = conn.execute(
sa.text("""
SELECT id, compose_template, definition_type
FROM tool_types
WHERE name = 'jupyter-notebook'
""")
).fetchone()
if result is None:
return
tool_id, compose_template, definition_type = result
if definition_type != "compose" or not compose_template:
return
if "command:" in compose_template:
return
lines = compose_template.split("\n")
new_lines = []
image_line_idx = -1
for i, line in enumerate(lines):
new_lines.append(line)
if "image:" in line and image_line_idx == -1:
image_line_idx = i
indent = line[: len(line) - len(line.lstrip())]
# Jupyter needs --ip=0.0.0.0 to bind to all interfaces
new_lines.append(
f"{indent}command: start-notebook.sh --ip=0.0.0.0 --port=8888 --no-browser"
)
if image_line_idx == -1:
return
updated_compose = "\n".join(new_lines)
conn.execute(
sa.text("""
UPDATE tool_types
SET compose_template = :compose_template
WHERE id = :id
"""),
{"compose_template": updated_compose, "id": tool_id},
)
print(f"Updated jupyter-notebook tool type ({tool_id}) to bind to 0.0.0.0:8888")
def upgrade() -> None:
conn = op.get_bind()
_fix_code_server_compose(conn)
_fix_jupyter_compose(conn)
def downgrade() -> None:
# Cannot safely downgrade without knowing the original compose_template
pass
@@ -1,121 +0,0 @@
"""Remove broken command override from LSIO code-server templates
Revision ID: 2026_05_29_remove_lsio_command_override
Revises: 2026_05_29_fix_code_server_bind_addr
Create Date: 2026-05-29 15:05:00.000000
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_remove_lsio_command_override"
down_revision: str | None = "2026_05_29_fix_code_server_bind_addr"
branch_labels: Sequence[str] | None = None
depends_on: Sequence[str] | None = None
def upgrade() -> None:
conn = op.get_bind()
# Fix tool_types templates in DB
result = conn.execute(
sa.text("""
SELECT id, compose_template
FROM tool_types
WHERE name = 'code-server'
""")
).fetchall()
import yaml
from pathlib import Path
for tool_id, compose_template in result:
try:
data = yaml.safe_load(compose_template)
except Exception:
continue
if not data or "services" not in data:
continue
modified = False
for svc in data["services"].values():
image = svc.get("image", "")
if not image or "linuxserver" not in image:
continue
if "command" in svc:
cmd = svc["command"]
if "--bind-addr" in cmd or "--host" in cmd:
del svc["command"]
modified = True
if modified:
updated = yaml.dump(data, default_flow_style=False)
conn.execute(
sa.text("""
UPDATE tool_types
SET compose_template = :compose_template
WHERE id = :id
"""),
{"compose_template": updated, "id": tool_id},
)
print(f"Removed broken command override from LSIO template ({tool_id})")
# Fix existing instance compose files on disk
# Use information_schema to check if compose_path column exists
col_result = conn.execute(
sa.text("""
SELECT column_name
FROM information_schema.columns
WHERE table_name = 'tool_instances'
AND column_name = 'compose_path'
""")
).fetchone()
if col_result:
result = conn.execute(
sa.text("""
SELECT id, compose_path
FROM tool_instances
WHERE compose_path IS NOT NULL
""")
).fetchall()
for instance_id, compose_path in result:
path = Path(compose_path)
if not path.exists():
continue
try:
content = path.read_text()
data = yaml.safe_load(content)
except Exception:
continue
if not data or "services" not in data:
continue
modified = False
for svc in data["services"].values():
image = svc.get("image", "")
if not image or "linuxserver" not in image:
continue
if "command" in svc:
cmd = svc["command"]
if "--bind-addr" in cmd or "--host" in cmd:
del svc["command"]
modified = True
if modified:
path.write_text(yaml.dump(data, default_flow_style=False))
print(
f"Removed broken command override from instance compose "
f"({instance_id})"
)
def downgrade() -> None:
pass
@@ -1,105 +0,0 @@
"""remove ssh_keys mount from pi-agent manifest
Revision ID: 2026_05_29_remove_ssh_keys_mount_from_manifest
Revises: 2026_05_29_add_ssh_key_ids_to_tool_instances
Create Date: 2026-05-29 14:00:00.000000
"""
import json
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_05_29_remove_ssh_keys_mount_from_manifest"
down_revision: Union[str, None] = "2026_05_29_add_ssh_key_ids_to_tool_instances"
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
"""Remove the ssh_keys mount from the pi-agent manifest."""
conn = op.get_bind()
# Get the pi-agent manifest
result = conn.execute(
sa.text(
"SELECT id, manifest FROM tool_definition_manifests WHERE name = 'pi-agent'"
)
)
row = result.fetchone()
if not row:
return
manifest_id, manifest_json = row
manifest = (
manifest_json if isinstance(manifest_json, dict) else json.loads(manifest_json)
)
mounts = manifest.get("mounts", [])
original_count = len(mounts)
# Remove any mount named "ssh_keys"
filtered_mounts = [m for m in mounts if m.get("name") != "ssh_keys"]
if len(filtered_mounts) < original_count:
manifest["mounts"] = filtered_mounts
conn.execute(
sa.text(
"UPDATE tool_definition_manifests SET manifest = :manifest WHERE id = :id"
),
{
"manifest": json.dumps(manifest),
"id": manifest_id,
},
)
def downgrade() -> None:
"""Restore the ssh_keys mount to the pi-agent manifest."""
conn = op.get_bind()
result = conn.execute(
sa.text(
"SELECT id, manifest FROM tool_definition_manifests WHERE name = 'pi-agent'"
)
)
row = result.fetchone()
if not row:
return
manifest_id, manifest_json = row
manifest = (
manifest_json if isinstance(manifest_json, dict) else json.loads(manifest_json)
)
mounts = manifest.get("mounts", [])
# Check if ssh_keys mount already exists
if any(m.get("name") == "ssh_keys" for m in mounts):
return
# Add the ssh_keys mount back
mounts.append(
{
"name": "ssh_keys",
"target": "/home/user/.ssh",
"source_type": "ssh_key",
"mode": "0700",
"file_mode": "0600",
"readonly": True,
}
)
manifest["mounts"] = mounts
conn.execute(
sa.text(
"UPDATE tool_definition_manifests SET manifest = :manifest WHERE id = :id"
),
{
"manifest": json.dumps(manifest),
"id": manifest_id,
},
)
@@ -1,81 +0,0 @@
"""add workspaces table
Revision ID: 2026_06_01_add_workspaces
Revises: 2026_05_29_fix_code_server_bind_addr_port
Create Date: 2026-06-01 10:00:00.000000
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = "2026_06_01_add_workspaces"
down_revision: str | None = "2026_05_29_fix_code_server_bind_addr_port"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def upgrade() -> None:
# Create workspaces table
op.create_table(
"workspaces",
sa.Column("id", sa.Uuid(as_uuid=True), primary_key=True),
sa.Column("name", sa.String(255), nullable=False),
sa.Column(
"repo_id",
sa.Uuid(as_uuid=True),
sa.ForeignKey("git_repositories.id", ondelete="CASCADE"),
nullable=False,
),
sa.Column(
"user_id",
sa.Uuid(as_uuid=True),
sa.ForeignKey("users.id", ondelete="CASCADE"),
nullable=False,
),
sa.Column("branch", sa.String(255), nullable=False, server_default="main"),
sa.Column("path", sa.String(2048), nullable=False),
sa.Column("status", sa.String(16), nullable=False, server_default="ready"),
sa.Column("last_sync_at", sa.DateTime(timezone=True), nullable=True),
sa.Column(
"created_at",
sa.DateTime(timezone=True),
server_default=sa.text("now()"),
nullable=False,
),
sa.Column(
"updated_at",
sa.DateTime(timezone=True),
server_default=sa.text("now()"),
nullable=False,
),
sa.UniqueConstraint("repo_id", "name", name="uq_workspace_repo_name"),
if_not_exists=True,
)
op.create_index("idx_workspaces_repo_id", "workspaces", ["repo_id"])
op.create_index("idx_workspaces_user_id", "workspaces", ["user_id"])
op.create_index("idx_workspaces_status", "workspaces", ["status"])
# Add workspace_id to tool_instances
op.add_column(
"tool_instances",
sa.Column(
"workspace_id",
sa.Uuid(as_uuid=True),
sa.ForeignKey("workspaces.id", ondelete="SET NULL"),
nullable=True,
),
)
op.create_index(
"idx_tool_instances_workspace_id", "tool_instances", ["workspace_id"]
)
def downgrade() -> None:
op.drop_index("idx_tool_instances_workspace_id", table_name="tool_instances")
op.drop_column("tool_instances", "workspace_id")
op.drop_table("workspaces")
@@ -1,35 +0,0 @@
"""make clone_mode nullable
Revision ID: 2026_06_13_make_clone_mode_nullable
Revises: 86cec91fdb00
Create Date: 2026-06-13 10:00:00.000000
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = "2026_06_13_make_clone_mode_nullable"
down_revision = "86cec91fdb00"
branch_labels = None
depends_on = None
def upgrade() -> None:
# The workspace-first cleanup no longer writes clone_mode; existing rows
# keep their value, but new rows may be NULL.
op.alter_column(
"tool_instances",
"clone_mode",
existing_type=sa.String(20),
nullable=True,
)
def downgrade() -> None:
op.alter_column(
"tool_instances",
"clone_mode",
existing_type=sa.String(20),
nullable=False,
)
@@ -1,23 +0,0 @@
"""merge_remove_is_builtin_and_add_config_profiles
Revision ID: 6fc7bfcf199f
Revises: 2026_05_23_remove_is_builtin, 2026_05_24_add_config_profiles
Create Date: 2026-05-24 18:00:43.990361
"""
# revision identifiers, used by Alembic.
revision = '6fc7bfcf199f'
down_revision = ('2026_05_23_remove_is_builtin', '2026_05_24_add_config_profiles')
branch_labels = None
depends_on = None
def upgrade() -> None:
pass
def downgrade() -> None:
pass
@@ -1,20 +0,0 @@
"""merge profile resolver and workspaces heads
Revision ID: 86cec91fdb00
Revises: 0014_add_profile_resolver_fields, 2026_06_01_add_workspaces
Create Date: 2026-06-03 12:48:36.145702
"""
# revision identifiers, used by Alembic.
revision = "86cec91fdb00"
down_revision = ("0014_add_profile_resolver_fields", "2026_06_01_add_workspaces")
branch_labels = None
depends_on = None
def upgrade() -> None:
pass
def downgrade() -> None:
pass
@@ -1,112 +0,0 @@
"""remove pi config and state mounts from pi-agent manifest
Revision ID: 8c6d1dbd4798
Revises: 2026_06_13_make_clone_mode_nullable
Create Date: 2026-06-13 11:21:25.983178
"""
import json
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = '8c6d1dbd4798'
down_revision = '2026_06_13_make_clone_mode_nullable'
branch_labels = None
depends_on = None
def _load_manifest(manifest_json):
return manifest_json if isinstance(manifest_json, dict) else json.loads(manifest_json)
def upgrade() -> None:
"""Remove pi_state and pi_config mounts from the pi-agent manifest."""
conn = op.get_bind()
result = conn.execute(
sa.text(
"SELECT id, manifest FROM tool_definition_manifests WHERE name = 'pi-agent'"
)
)
row = result.fetchone()
if not row:
return
manifest_id, manifest_json = row
manifest = _load_manifest(manifest_json)
mounts = manifest.get("mounts", [])
original_count = len(mounts)
filtered_mounts = [
m for m in mounts if m.get("name") not in ("pi_state", "pi_config")
]
if len(filtered_mounts) < original_count:
manifest["mounts"] = filtered_mounts
conn.execute(
sa.text(
"UPDATE tool_definition_manifests SET manifest = :manifest WHERE id = :id"
),
{
"manifest": json.dumps(manifest),
"id": manifest_id,
},
)
def downgrade() -> None:
"""Restore pi_state and pi_config mounts to the pi-agent manifest."""
conn = op.get_bind()
result = conn.execute(
sa.text(
"SELECT id, manifest FROM tool_definition_manifests WHERE name = 'pi-agent'"
)
)
row = result.fetchone()
if not row:
return
manifest_id, manifest_json = row
manifest = _load_manifest(manifest_json)
mounts = manifest.get("mounts", [])
existing_names = {m.get("name") for m in mounts}
if "pi_state" not in existing_names:
mounts.append(
{
"name": "pi_state",
"target": "/tmp/.pi/agents",
"source_type": "instance",
"writable": True,
}
)
if "pi_config" not in existing_names:
mounts.append(
{
"name": "pi_config",
"target": "/home/user/.pi",
"source_type": "git_mount",
"git_mount_ref": "dotfiles",
"writable": True,
"owner": "user",
}
)
manifest["mounts"] = mounts
conn.execute(
sa.text(
"UPDATE tool_definition_manifests SET manifest = :manifest WHERE id = :id"
),
{
"manifest": json.dumps(manifest),
"id": manifest_id,
},
)
@@ -1,23 +0,0 @@
"""merge_single_interface_and_clone_mode
Revision ID: f3d2dc90ba3a
Revises: 0015_single_interface, 2026_05_22_add_clone_mode
Create Date: 2026-05-24 10:43:14.000000
"""
from typing import Sequence, Union
# revision identifiers, used by Alembic.
revision: str = "f3d2dc90ba3a"
down_revision: Union[str, Sequence[str], None] = ("0015_single_interface", "2026_05_22_add_clone_mode")
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
pass
def downgrade() -> None:
pass
-54
View File
@@ -1,54 +0,0 @@
# apps/api/src (index)
dir: apps/api/src
## role
Core API application package that initializes and configures the Headquarter FastAPI backend with database, authentication, logging, and middleware infrastructure.
## parent
index: apps/api/.pi-map.index.md
map: apps/api/.pi-map.md
## children
- apps/api/src/api
index: apps/api/src/api/.pi-map.index.md
map: apps/api/src/api/.pi-map.md
- apps/api/src/auth
index: apps/api/src/auth/.pi-map.index.md
map: apps/api/src/auth/.pi-map.md
- apps/api/src/headquarter_api.egg-info
index: apps/api/src/headquarter_api.egg-info/.pi-map.index.md
map: apps/api/src/headquarter_api.egg-info/.pi-map.md
- apps/api/src/models
index: apps/api/src/models/.pi-map.index.md
map: apps/api/src/models/.pi-map.md
- apps/api/src/schemas
index: apps/api/src/schemas/.pi-map.index.md
map: apps/api/src/schemas/.pi-map.md
- apps/api/src/scripts
index: apps/api/src/scripts/.pi-map.index.md
map: apps/api/src/scripts/.pi-map.md
- apps/api/src/seeds
index: apps/api/src/seeds/.pi-map.index.md
map: apps/api/src/seeds/.pi-map.md
- apps/api/src/services
index: apps/api/src/services/.pi-map.index.md
map: apps/api/src/services/.pi-map.md
- apps/api/src/utils
index: apps/api/src/utils/.pi-map.index.md
map: apps/api/src/utils/.pi-map.md
## files
- __init__.py
- config.py
- database.py
- logging_config.py
- main.py
## links
index: apps/api/src/.pi-map.index.md
map: apps/api/src/.pi-map.md
## workflows
- change src behavior
read: __init__.py, config.py, database.py
- change src config
read: config.py, logging_config.py
- explore src subdirectories
index: apps/api/src/api/.pi-map.index.md, apps/api/src/auth/.pi-map.index.md, apps/api/src/headquarter_api.egg-info/.pi-map.index.md
## dirty
-
-35
View File
@@ -1,35 +0,0 @@
# apps/api/src
dir: apps/api/src
index: apps/api/src/.pi-map.index.md
## role
Core API application package that initializes and configures the Headquarter FastAPI backend with database, authentication, logging, and middleware infrastructure.
## files
- __init__.py | Marks the directory as a Python package for the Headquarter API.
- config.py | Defines application configuration settings with environment-based overrides using Pydantic, including database URLs, service domains, OAuth/Authentik integration, JWT/session settings, and computed properties for environment-specific behavior. | exp: class:Settings, func:build_database_url(user: str, password: str, host: str, port: int, database: str) → str | dep: pydantic, pydantic_settings
- database.py | Sets up async SQLAlchemy database engine and session factory, with retry logic for database connectivity testing and Alembic migration execution via subprocess. | exp: func:init_database(max_retries, retry_delay) → bool, call:range, call:engine.connect, call:test_conn.execute, call:text, call:test_conn.close, call:logger.info, call:asyncio.get_event_loop().run_in_executor, call:subprocess.run, call:os.path.dirname, call:os.path.abspath, call:logger.debug, call:logger.error, call:asyncio.sleep, call:str(exc).lower, call:logger.warning | dep: asyncio, logging, os, subprocess, sqlalchemy.ext.asyncio, sqlalchemy.pool, src.config, sqlalchemy
- logging_config.py | Configures structured JSON logging with correlation ID injection, custom formatters, and HTTP request/exception middleware for a FastAPI application. | exp: class:CorrelationIdFilter, method:filter(self, record: logging.LogRecord) → bool, call:get_correlation_id, class:JSONFormatter, method:format(self, record: logging.LogRecord) → str, call:self.formatTime, call:record.getMessage, call:getattr, call:self.formatException, call:json.dumps, method:formatTime(self, record: logging.LogRecord, datefmt) → str, call:time.strftime, call:time.gmtime, class:RequestLoggingMiddleware, method:dispatch(self, request: Request, call_next: Callable) → Response, call:time.time, call:logger.info, call:call_next, call:int, call:logger.error, call:type, call:traceback.format_exc, class:ExceptionLoggingMiddleware, method:dispatch(self, request: Request, call_next: Callable) → Response, call:call_next, call:logger.critical, call:traceback.format_exc, func:configure_logging(level) → None, call:JSONFormatter, call:logging.StreamHandler, call:console_handler.setFormatter, call:console_handler.addFilter, call:CorrelationIdFilter, call:root_logger.setLevel, call:logging.getLogger("uvicorn").setLevel, call:logging.getLogger("uvicorn.access").setLevel, call:logging.getLogger("sqlalchemy.engine").setLevel, call:logger.info, call:logging.getLevelName | dep: json, logging, sys, time, traceback, collections.abc, fastapi, starlette.middleware.base, src.services.shared.correlation
- main.py | Initializes and configures a FastAPI application for the "Headquarter API" with database setup, middleware, routing, and background services. | exp: func:_sanitize_validation_errors(errors), call:error.get, call:str, call:ctx.items, call:isinstance, call:type, call:sanitized.append, func:validation_exception_handler(request: Request, exc: RequestValidationError), call:exc.errors, call:logger.warning, call:_sanitize_validation_errors, call:JSONResponse, func:on_startup(), call:logger.info, call:init_database, call:logger.error, call:sys.exit, call:_health_monitor.start, call:seed_builtin_tool_types, func:on_shutdown(), call:logger.info, call:_health_monitor.stop | dep: logging, os, fastapi, fastapi.exceptions, fastapi.middleware.cors, fastapi.responses, fastapi.staticfiles, src.api.config, src.api.project, src.api.system, src.api.tool, src.api.user, src.api.workspace, src.config, src.models, src.database, src.logging_config, src.seeds.builtin_tool_types, src.services.instance, src.services.shared, sys, src.api.*
## arch
Layered architecture using Pydantic for environment-based configuration, async SQLAlchemy with Alembic migrations, structured JSON logging with correlation IDs, and FastAPI middleware/routing pattern for a service-oriented backend.
## tags
src, database, logging, call:logger.info, api, middleware, fastapi, filter
## symbols
- Settings
- CorrelationIdFilter
- JSONFormatter
- RequestLoggingMiddleware
- ExceptionLoggingMiddleware
- build_database_url
- init_database
- filter
## workflows
- change src behavior
read: __init__.py, config.py, database.py
- change src config
read: config.py, logging_config.py
- explore src subdirectories
index: apps/api/src/api/.pi-map.index.md, apps/api/src/auth/.pi-map.index.md, apps/api/src/headquarter_api.egg-info/.pi-map.index.md
## dirty
-
-40
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@@ -1,40 +0,0 @@
# apps/api/src/api (index)
dir: apps/api/src/api
## role
Defines shared API infrastructure including reusable Pydantic validators for consistent input validation across API endpoints.
## parent
index: apps/api/src/.pi-map.index.md
map: apps/api/src/.pi-map.md
## children
- apps/api/src/api/config
index: apps/api/src/api/config/.pi-map.index.md
map: apps/api/src/api/config/.pi-map.md
- apps/api/src/api/project
index: apps/api/src/api/project/.pi-map.index.md
map: apps/api/src/api/project/.pi-map.md
- apps/api/src/api/system
index: apps/api/src/api/system/.pi-map.index.md
map: apps/api/src/api/system/.pi-map.md
- apps/api/src/api/tool
index: apps/api/src/api/tool/.pi-map.index.md
map: apps/api/src/api/tool/.pi-map.md
- apps/api/src/api/user
index: apps/api/src/api/user/.pi-map.index.md
map: apps/api/src/api/user/.pi-map.md
- apps/api/src/api/workspace
index: apps/api/src/api/workspace/.pi-map.index.md
map: apps/api/src/api/workspace/.pi-map.md
## files
- __init__.py
- shared_validators.py
## links
index: apps/api/src/api/.pi-map.index.md
map: apps/api/src/api/.pi-map.md
## workflows
- change api behavior
read: __init__.py, shared_validators.py
- explore api subdirectories
index: apps/api/src/api/config/.pi-map.index.md, apps/api/src/api/project/.pi-map.index.md, apps/api/src/api/system/.pi-map.index.md
## dirty
-
-30
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@@ -1,30 +0,0 @@
# apps/api/src/api
dir: apps/api/src/api
index: apps/api/src/api/.pi-map.index.md
## role
Defines shared API infrastructure including reusable Pydantic validators for consistent input validation across API endpoints.
## files
- __init__.py | Marks the directory as a Python package for API routers.
- shared_validators.py | Provides reusable Pydantic validator functions for API schema validation including mount paths, files, environment variables, and volume mounts. | exp: func:validate_mount_path(v: str | None) → str | None, call:v.startswith, raise:ValueError, func:validate_files(v: dict | None, max_size_bytes) → dict | None, call:v.items, call:path.startswith, call:len, call:content.encode, raise:ValueError, func:validate_env_vars(v: dict | None) → dict | None, call:isinstance, raise:ValueError, func:validate_volumes(v: list | None) → list | None, call:isinstance, call:enumerate, raise:ValueError
## arch
Modular utility package with functional validation helpers using Pydantic for declarative schema enforcement.
## tags
validate, raise:value, error, call:isinstance, mount, api, init, path
## symbols
- validate_mount_path
- validate_files
- validate_env_vars
- validate_volumes
- call:v.startswith
- raise:ValueError
- call:v.items
- call:path.startswith
## workflows
- change api behavior
read: __init__.py, shared_validators.py
- explore api subdirectories
index: apps/api/src/api/config/.pi-map.index.md, apps/api/src/api/project/.pi-map.index.md, apps/api/src/api/system/.pi-map.index.md
## dirty
-
+4 -1
View File
@@ -1 +1,4 @@
"""API routers package."""
from src.api.auth import router as auth_router
from src.api.users import router as users_router
__all__ = ["auth_router", "users_router"]
@@ -48,7 +48,7 @@ async def login(next: str = "/") -> RedirectResponse:
redirect_uri=redirect_uri,
state=state,
)
logger.debug("Auth login initiated: redirect_uri=%s, next=%s", redirect_uri, next)
logger.info("Auth login initiated: redirect_uri=%s, next=%s", redirect_uri, next)
response = RedirectResponse(location)
response.set_cookie("auth_state", state, httponly=True, samesite="lax")
response.set_cookie("auth_next", next, httponly=True, samesite="lax")
@@ -63,7 +63,7 @@ async def callback(
auth_next: str | None = Cookie(default="/"),
session: AsyncSession = Depends(get_db_session),
) -> RedirectResponse:
logger.debug("Auth callback received: code=%s... state=%s", code[:10] if code else "None", state[:10] if state else "None")
logger.info("Auth callback received: code=%s... state=%s", code[:10] if code else "None", state[:10] if state else "None")
if auth_state is None or auth_state != state:
logger.warning("State mismatch: cookie=%s, param=%s", auth_state, state)
@@ -71,7 +71,7 @@ async def callback(
settings = Settings()
redirect_uri = f"{settings.api_base_url}/auth/callback"
logger.debug("Exchanging code for tokens (redirect_uri=%s)", redirect_uri)
logger.info("Exchanging code for tokens (redirect_uri=%s)", redirect_uri)
async with httpx.AsyncClient() as client:
try:
@@ -92,7 +92,7 @@ async def callback(
access_token=token_payload["access_token"],
client=client,
)
logger.debug("User info fetched successfully")
logger.info("User info fetched successfully")
except Exception as exc:
logger.error("User info fetch failed: %s", exc)
raise HTTPException(status_code=status.HTTP_500_INTERNAL_SERVER_ERROR, detail="failed to fetch user info")
@@ -100,19 +100,19 @@ async def callback(
authentik_id = str(user_info.get("sub", ""))
email = str(user_info.get("email", f"{authentik_id}@authentik.local"))
name = str(user_info.get("name", email))
logger.debug("User info: authentik_id=%s, email=%s, name=%s", authentik_id, email, name)
logger.info("User info: authentik_id=%s, email=%s, name=%s", authentik_id, email, name)
try:
user = await session.scalar(select(User).where(User.authentik_id == authentik_id))
if user is None:
logger.debug("Creating new user: authentik_id=%s", authentik_id)
logger.info("Creating new user: authentik_id=%s", authentik_id)
user = User(email=email, name=name, authentik_id=authentik_id, avatar_url=None)
session.add(user)
await session.commit()
await session.refresh(user)
logger.info("New user created: id=%s", user.id)
else:
logger.debug("Existing user found: id=%s, updating info", user.id)
logger.info("Existing user found: id=%s, updating info", user.id)
user.email = email
user.name = name
await session.commit()
@@ -165,20 +165,20 @@ async def me(
session_cookie: str | None = Cookie(default=None, alias="session"),
session: AsyncSession = Depends(get_db_session),
) -> dict[str, Any]:
logger.debug("Auth /me called, cookie present: %s", bool(session_cookie))
logger.info("Auth /me called, cookie present: %s", bool(session_cookie))
if not session_cookie:
logger.warning("Auth /me: missing session cookie")
raise HTTPException(status_code=status.HTTP_401_UNAUTHORIZED, detail="missing session")
settings = Settings()
logger.debug("Auth /me: cookie_domain=%s, cookie_secure=%s, cookie_samesite=%s",
logger.info("Auth /me: cookie_domain=%s, cookie_secure=%s, cookie_samesite=%s",
settings.cookie_domain, settings.cookie_secure, settings.cookie_samesite)
try:
payload = decode_session_cookie(settings=settings, cookie_value=session_cookie)
user_id = payload["user_id"]
logger.debug("Auth /me: decoded session for user_id=%s", user_id)
logger.info("Auth /me: decoded session for user_id=%s", user_id)
except ValueError as exc:
logger.warning("Auth /me: invalid session: %s", exc)
raise HTTPException(status_code=status.HTTP_401_UNAUTHORIZED, detail=str(exc))
-24
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@@ -1,24 +0,0 @@
# apps/api/src/api/config (index)
dir: apps/api/src/api/config
## role
Provides FastAPI API endpoints for managing user configuration settings and configuration profiles.
## parent
index: apps/api/src/api/.pi-map.index.md
map: apps/api/src/api/.pi-map.md
## children
-
## files
- __init__.py
- config_profiles.py
- user_config.py
## links
index: apps/api/src/api/config/.pi-map.index.md
map: apps/api/src/api/config/.pi-map.md
## workflows
- change config behavior
read: __init__.py, config_profiles.py, user_config.py
- change config config
read: config_profiles.py, user_config.py
## dirty
-
-31
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@@ -1,31 +0,0 @@
# apps/api/src/api/config
dir: apps/api/src/api/config
index: apps/api/src/api/config/.pi-map.index.md
## role
Provides FastAPI API endpoints for managing user configuration settings and configuration profiles.
## files
- __init__.py | Aggregates and exports configuration-related API routers for the config module. | dep: src.api.config.config_profiles, src.api.config.user_config
- config_profiles.py | FastAPI router providing CRUD endpoints for user config profiles with includes, resolution, defaults, and git URL validation | exp: func:list_config_profiles(project_id, tool_type_id, current_user_id, session), call:select(ConfigProfile) .where(ConfigProfile.user_id == user_uuid) .options, call:selectinload, call:uuid.UUID, call:conditions.append, call:ConfigProfile.project_id.is_, call:ConfigProfile.tool_type_id.is_, call:query.where, call:or_, call:session.execute, call:result.scalars().all, call:profile_to_response, func:create_config_profile(data: ConfigProfileCreate, current_user_id, session), call:create_profile, call:logger.debug, call:profile_to_response, func:get_config_profile(profile_id: str, current_user_id, session), call:get_profile_with_includes, call:uuid.UUID, call:profile_to_response, raise:HTTPException, func:update_config_profile(profile_id: str, data: ConfigProfileUpdate, current_user_id, session), call:get_profile_with_includes, call:uuid.UUID, call:update_profile, call:logger.debug, call:profile_to_response, raise:HTTPException, func:delete_config_profile(profile_id: str, current_user_id, session), call:get_profile_with_includes, call:uuid.UUID, call:session.delete, call:session.commit, call:logger.debug, raise:HTTPException, func:update_profile_includes_endpoint(profile_id: str, data: ConfigProfileIncludeUpdate, current_user_id, session), call:get_profile_with_includes, call:uuid.UUID, call:update_includes, call:session.execute, call:select(ConfigProfileInclude).where, call:inc_result.scalars().all, call:logger.debug, call:profile_to_response, call:list, raise:HTTPException, func:preview_config_profile(profile_id: str, current_user_id, session), call:get_profile_with_includes, call:uuid.UUID, call:resolve_profile, call:resolved_profile_to_dict, raise:HTTPException, func:resolve_default_profile_endpoint(project_id, tool_type_id, current_user_id, session), call:resolve_default_profile, call:uuid.UUID, func:get_default_profiles_endpoint(user_id, session) → dict, call:session.execute, call:select(UserConfig).where, call:result.scalar_one_or_none, func:set_default_profiles_endpoint(data: DefaultProfilesUpdate, user_id, session) → dict, call:validate_default_profiles, call:get_or_create_user_config, call:session.commit, call:session.refresh, func:get_default_profile_for_tool_type_endpoint(tool_type_id: str, user_id, session) → dict, call:session.execute, call:select(UserConfig).where, call:result.scalar_one_or_none, call:user_config.default_profiles.get, func:validate_git_url_endpoint(data: ValidateGitUrlRequest, current_user_id, session) → ValidateGitUrlResponse, call:validate_git_url | dep: logging, uuid, fastapi, sqlalchemy, sqlalchemy.ext.asyncio, sqlalchemy.orm, src.auth.dependencies, src.models, src.schemas.config, src.services.config.config_profile_resolver, src.services.config.crud_service, src.services.config.resolver_service
- user_config.py | Provides FastAPI endpoints to get and update the current user's configuration settings, creating a default config if none exists. | exp: func:_get_or_create_config(session: AsyncSession, user_id: uuid.UUID) → UserConfig, call:session.execute, call:select(UserConfig).where, call:result.scalar_one_or_none, call:UserConfig, call:session.add, call:session.commit, call:session.refresh, func:get_user_config(user_id, session) → UserConfigResponse, call:_get_user, call:_get_or_create_config, call:UserConfigResponse.model_validate, func:update_user_config(data: UserConfigUpdate, user_id, session) → UserConfigResponse, call:_get_user, call:_get_or_create_config, call:data.model_dump, call:logger.debug, call:session.commit, call:session.refresh, call:UserConfigResponse.model_validate | dep: logging, uuid, fastapi, sqlalchemy, sqlalchemy.ext.asyncio, src.auth.dependencies, src.models, src.schemas.user
## arch
Modular FastAPI router pattern with separate route modules for distinct resource domains (user config vs config profiles), each implementing standard CRUD operations with validation and default initialization logic.
## tags
config, profile, get, user, includes, call:uuid.uuid, or, default
## symbols
- list_config_profiles
- create_config_profile
- get_config_profile
- update_config_profile
- delete_config_profile
- update_profile_includes_endpoint
- preview_config_profile
- resolve_default_profile_endpoint
## workflows
- change config behavior
read: __init__.py, config_profiles.py, user_config.py
- change config config
read: config_profiles.py, user_config.py
## dirty
-
-6
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@@ -1,6 +0,0 @@
"""Config API routers module."""
from src.api.config.config_profiles import router as config_profiles_router
from src.api.config.user_config import router as user_config_router
__all__ = ["config_profiles_router", "user_config_router"]
-300
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@@ -1,300 +0,0 @@
"""Config profile API endpoints."""
import logging
import uuid
from fastapi import APIRouter, Depends, HTTPException, Query, status
from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from sqlalchemy.orm import selectinload
from src.auth.dependencies import get_current_user_id, get_db_session
from src.models import ConfigProfile, ConfigProfileInclude, UserConfig
from src.schemas.config import (
ConfigProfileCreate,
ConfigProfileIncludeUpdate,
ConfigProfileResponse,
ConfigProfileUpdate,
DefaultProfilesUpdate,
ValidateGitUrlRequest,
ValidateGitUrlResponse,
)
from src.services.config.config_profile_resolver import (
ConfigProfileCycleError,
resolve_profile,
resolved_profile_to_dict,
)
from src.services.config.crud_service import (
create_profile,
get_or_create_user_config,
get_profile_with_includes,
profile_to_response,
update_includes,
update_profile,
validate_default_profiles,
)
from src.services.config.resolver_service import (
resolve_default_profile,
validate_git_url,
)
logger = logging.getLogger(__name__)
router = APIRouter(prefix="/config-profiles", tags=["config-profiles"])
@router.get("", response_model=list[ConfigProfileResponse])
async def list_config_profiles(
project_id: str | None = Query(None, description="Filter by project compatibility"),
tool_type_id: str | None = Query(
None, description="Filter by tool type compatibility"
),
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""List config profiles, optionally filtered by compatibility."""
user_uuid = current_user_id
query = (
select(ConfigProfile)
.where(ConfigProfile.user_id == user_uuid)
.options(selectinload(ConfigProfile.includes))
)
if project_id or tool_type_id:
from sqlalchemy import or_
project_uuid = uuid.UUID(project_id) if project_id else None
tool_uuid = uuid.UUID(tool_type_id) if tool_type_id else None
conditions: list = []
conditions.append(
(ConfigProfile.project_id.is_(None))
& (ConfigProfile.tool_type_id.is_(None))
)
if project_uuid:
conditions.append(ConfigProfile.project_id == project_uuid)
if tool_uuid:
conditions.append(ConfigProfile.tool_type_id == tool_uuid)
if project_uuid and tool_uuid:
conditions.append(
(ConfigProfile.project_id == project_uuid)
& (ConfigProfile.tool_type_id == tool_uuid)
)
query = query.where(or_(*conditions))
result = await session.execute(query)
profiles = result.scalars().all()
return [profile_to_response(p) for p in profiles]
@router.post(
"", response_model=ConfigProfileResponse, status_code=status.HTTP_201_CREATED
)
async def create_config_profile(
data: ConfigProfileCreate,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Create a new config profile."""
profile = await create_profile(session, current_user_id, data)
logger.debug("Created config profile %s for user %s", profile.id, current_user_id)
return profile_to_response(profile)
@router.get("/{profile_id}", response_model=ConfigProfileResponse)
async def get_config_profile(
profile_id: str,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Get a config profile by ID."""
profile = await get_profile_with_includes(session, uuid.UUID(profile_id))
if profile is None:
raise HTTPException(
status_code=status.HTTP_404_NOT_FOUND, detail="Profile not found"
)
if profile.user_id != current_user_id:
raise HTTPException(
status_code=status.HTTP_403_FORBIDDEN, detail="Not authorized"
)
return profile_to_response(profile)
@router.put("/{profile_id}", response_model=ConfigProfileResponse)
async def update_config_profile(
profile_id: str,
data: ConfigProfileUpdate,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Update a config profile."""
profile = await get_profile_with_includes(session, uuid.UUID(profile_id))
if profile is None:
raise HTTPException(
status_code=status.HTTP_404_NOT_FOUND, detail="Profile not found"
)
if profile.user_id != current_user_id:
raise HTTPException(
status_code=status.HTTP_403_FORBIDDEN, detail="Not authorized"
)
profile = await update_profile(session, profile, data)
logger.debug("Updated config profile %s", profile.id)
return profile_to_response(profile)
@router.delete("/{profile_id}", status_code=status.HTTP_204_NO_CONTENT)
async def delete_config_profile(
profile_id: str,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Delete a config profile."""
profile = await get_profile_with_includes(session, uuid.UUID(profile_id))
if profile is None:
raise HTTPException(
status_code=status.HTTP_404_NOT_FOUND, detail="Profile not found"
)
if profile.user_id != current_user_id:
raise HTTPException(
status_code=status.HTTP_403_FORBIDDEN, detail="Not authorized"
)
await session.delete(profile)
await session.commit()
logger.debug("Deleted config profile %s", profile_id)
return None
@router.put("/{profile_id}/includes", response_model=ConfigProfileResponse)
async def update_profile_includes_endpoint(
profile_id: str,
data: ConfigProfileIncludeUpdate,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Update the ordered includes for a config profile."""
profile = await get_profile_with_includes(session, uuid.UUID(profile_id))
if profile is None:
raise HTTPException(
status_code=status.HTTP_404_NOT_FOUND, detail="Profile not found"
)
if profile.user_id != current_user_id:
raise HTTPException(
status_code=status.HTTP_403_FORBIDDEN, detail="Not authorized"
)
included_uuids = [uuid.UUID(inc_id) for inc_id in data.includes]
profile = await update_includes(session, profile, included_uuids, current_user_id)
inc_result = await session.execute(
select(ConfigProfileInclude).where(
ConfigProfileInclude.profile_id == profile.id
)
)
direct_includes = inc_result.scalars().all()
logger.debug("Updated includes for config profile %s", profile.id)
return profile_to_response(profile, list(direct_includes))
@router.get("/{profile_id}/preview")
async def preview_config_profile(
profile_id: str,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Preview the resolved output of a config profile."""
profile = await get_profile_with_includes(session, uuid.UUID(profile_id))
if profile is None:
raise HTTPException(
status_code=status.HTTP_404_NOT_FOUND, detail="Profile not found"
)
if profile.user_id != current_user_id:
raise HTTPException(
status_code=status.HTTP_403_FORBIDDEN, detail="Not authorized"
)
try:
resolved = await resolve_profile(session, profile.id)
except ConfigProfileCycleError as exc:
raise HTTPException(
status_code=status.HTTP_400_BAD_REQUEST,
detail=str(exc),
)
return resolved_profile_to_dict(resolved)
@router.get("/defaults/resolve")
async def resolve_default_profile_endpoint(
project_id: str = Query(..., description="Project ID"),
tool_type_id: str = Query(..., description="Tool type ID"),
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
):
"""Resolve the default config profile for a project/tool combination."""
return await resolve_default_profile(
session,
current_user_id,
uuid.UUID(project_id),
uuid.UUID(tool_type_id),
)
@router.get("/defaults")
async def get_default_profiles_endpoint(
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Get all default profile mappings for the current user."""
result = await session.execute(
select(UserConfig).where(UserConfig.user_id == user_id)
)
user_config = result.scalar_one_or_none()
return {"default_profiles": user_config.default_profiles if user_config else {}}
@router.put("/defaults")
async def set_default_profiles_endpoint(
data: DefaultProfilesUpdate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Set default profile mappings for the current user."""
await validate_default_profiles(session, user_id, data.default_profiles)
user_config = await get_or_create_user_config(session, user_id)
user_config.config = {
**user_config.config,
"default_profiles": data.default_profiles,
}
await session.commit()
await session.refresh(user_config)
return {"default_profiles": user_config.default_profiles}
@router.get("/defaults/{tool_type_id}")
async def get_default_profile_for_tool_type_endpoint(
tool_type_id: str,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Get the default profile ID for a specific tool type."""
result = await session.execute(
select(UserConfig).where(UserConfig.user_id == user_id)
)
user_config = result.scalar_one_or_none()
profile_id = user_config.default_profiles.get(tool_type_id) if user_config else None
return {"tool_type_id": tool_type_id, "profile_id": profile_id}
@router.post("/validate-git-url", response_model=ValidateGitUrlResponse)
async def validate_git_url_endpoint(
data: ValidateGitUrlRequest,
current_user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> ValidateGitUrlResponse:
"""Validate a git remote URL and list available branches."""
return await validate_git_url(session, current_user_id, data.url, data.ssh_key_id)
+372
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@@ -0,0 +1,372 @@
"""Config folder API endpoints."""
import logging
import uuid
from fastapi import APIRouter, Depends, HTTPException, status
from pydantic import BaseModel, Field, field_validator
from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from src.auth.dependencies import get_current_user_id, get_db_session
from src.models.config_folder import ConfigFolder
logger = logging.getLogger(__name__)
router = APIRouter(prefix="/config-folders", tags=["config-folders"])
MAX_FOLDER_SIZE_MB = 10
MAX_FOLDER_SIZE_BYTES = MAX_FOLDER_SIZE_MB * 1024 * 1024
class ConfigFolderCreate(BaseModel):
name: str = Field(description="Folder name (unique per user)")
description: str | None = Field(default=None, description="Optional description")
mount_path: str = Field(description="Default mount path in container")
files: dict = Field(default_factory=dict, description="Files as {path: content}")
@field_validator("mount_path")
@classmethod
def validate_mount_path(cls, v: str) -> str:
if not v.startswith("/"):
raise ValueError("Mount path must be absolute (start with /)")
return v
@field_validator("files")
@classmethod
def validate_files(cls, v: dict) -> dict:
total_size = 0
for path, content in v.items():
# Check for path traversal
if ".." in path or path.startswith("/"):
raise ValueError(f"Invalid file path: {path}")
total_size += len(content.encode("utf-8"))
if total_size > MAX_FOLDER_SIZE_BYTES:
raise ValueError(f"Total folder size exceeds {MAX_FOLDER_SIZE_MB}MB limit")
return v
class ConfigFolderUpdate(BaseModel):
name: str | None = Field(default=None, description="Folder name")
description: str | None = Field(default=None, description="Optional description")
mount_path: str | None = Field(default=None, description="Default mount path")
files: dict | None = Field(default=None, description="Files as {path: content}")
is_active: bool | None = Field(default=None, description="Active/inactive toggle")
@field_validator("mount_path")
@classmethod
def validate_mount_path(cls, v: str | None) -> str | None:
if v is None:
return v
if not v.startswith("/"):
raise ValueError("Mount path must be absolute (start with /)")
return v
@field_validator("files")
@classmethod
def validate_files(cls, v: dict | None) -> dict | None:
if v is None:
return v
total_size = 0
for path, content in v.items():
# Check for path traversal
if ".." in path or path.startswith("/"):
raise ValueError(f"Invalid file path: {path}")
total_size += len(content.encode("utf-8"))
if total_size > MAX_FOLDER_SIZE_BYTES:
raise ValueError(f"Total folder size exceeds {MAX_FOLDER_SIZE_MB}MB limit")
return v
class ProjectOverrideCreate(BaseModel):
mount_path: str | None = Field(default=None, description="Override mount path")
files: dict = Field(default_factory=dict, description="Override files")
@field_validator("mount_path")
@classmethod
def validate_mount_path(cls, v: str | None) -> str | None:
if v is None:
return v
if not v.startswith("/"):
raise ValueError("Mount path must be absolute (start with /)")
return v
class ConfigFolderResponse(BaseModel):
id: str
user_id: str
name: str
description: str | None
mount_path: str
files: dict
project_overrides: dict | None
is_active: bool
created_at: str
updated_at: str
@router.get("", summary="List config folders", description="Get all config folders for the current user.")
async def list_config_folders(
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""List config folders for the current user."""
query = select(ConfigFolder).where(ConfigFolder.user_id == user_id)
result = await session.execute(query)
folders = result.scalars().all()
return {
"folders": [
{
"id": str(f.id),
"user_id": str(f.user_id),
"name": f.name,
"description": f.description,
"mount_path": f.mount_path,
"files": f.files,
"project_overrides": f.project_overrides,
"is_active": f.is_active,
"created_at": f.created_at.isoformat() if f.created_at else None,
"updated_at": f.updated_at.isoformat() if f.updated_at else None,
}
for f in folders
]
}
@router.post("", summary="Create config folder", description="Create a new config folder.", status_code=status.HTTP_201_CREATED)
async def create_config_folder(
data: ConfigFolderCreate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Create a config folder."""
# Check for duplicate name
existing = await session.scalar(
select(ConfigFolder).where(
ConfigFolder.user_id == user_id,
ConfigFolder.name == data.name,
)
)
if existing:
raise HTTPException(
status_code=status.HTTP_409_CONFLICT,
detail=f"config folder with name '{data.name}' already exists"
)
folder = ConfigFolder(
user_id=user_id,
name=data.name,
description=data.description,
mount_path=data.mount_path,
files=data.files,
)
session.add(folder)
await session.commit()
await session.refresh(folder)
return {
"id": str(folder.id),
"user_id": str(folder.user_id),
"name": folder.name,
"description": folder.description,
"mount_path": folder.mount_path,
"files": folder.files,
"project_overrides": folder.project_overrides,
"is_active": folder.is_active,
"created_at": folder.created_at.isoformat() if folder.created_at else None,
"updated_at": folder.updated_at.isoformat() if folder.updated_at else None,
}
@router.put("/{folder_id}", summary="Update config folder", description="Update an existing config folder.")
async def update_config_folder(
folder_id: uuid.UUID,
data: ConfigFolderUpdate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Update a config folder."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
if data.name is not None:
folder.name = data.name
if data.description is not None:
folder.description = data.description
if data.mount_path is not None:
folder.mount_path = data.mount_path
if data.files is not None:
folder.files = data.files
if data.is_active is not None:
folder.is_active = data.is_active
await session.commit()
await session.refresh(folder)
return {
"id": str(folder.id),
"user_id": str(folder.user_id),
"name": folder.name,
"description": folder.description,
"mount_path": folder.mount_path,
"files": folder.files,
"project_overrides": folder.project_overrides,
"is_active": folder.is_active,
"created_at": folder.created_at.isoformat() if folder.created_at else None,
"updated_at": folder.updated_at.isoformat() if folder.updated_at else None,
}
@router.delete("/{folder_id}", summary="Delete config folder", description="Delete a config folder.", status_code=status.HTTP_204_NO_CONTENT)
async def delete_config_folder(
folder_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> None:
"""Delete a config folder."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
await session.delete(folder)
await session.commit()
class ProjectOverrideWithId(ProjectOverrideCreate):
project_id: uuid.UUID = Field(description="Project ID for the override")
@router.get("/{folder_id}", summary="Get config folder by ID", description="Get a single config folder by its ID.")
async def get_config_folder(
folder_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Get a config folder by ID."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
return {
"id": str(folder.id),
"user_id": str(folder.user_id),
"name": folder.name,
"description": folder.description,
"mount_path": folder.mount_path,
"files": folder.files,
"project_overrides": folder.project_overrides,
"is_active": folder.is_active,
"created_at": folder.created_at.isoformat() if folder.created_at else None,
"updated_at": folder.updated_at.isoformat() if folder.updated_at else None,
}
@router.post("/{folder_id}/overrides", summary="Add project override", description="Add a project override to a config folder.")
async def add_project_override(
folder_id: uuid.UUID,
data: ProjectOverrideWithId,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Add a project override to a config folder."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
# Initialize project_overrides if None
if folder.project_overrides is None:
folder.project_overrides = {}
# Add/update override
override_data = {}
if data.mount_path is not None:
override_data["mount_path"] = data.mount_path
if data.files is not None:
override_data["files"] = data.files
# Use a copy to trigger SQLAlchemy change detection on JSONB
current_overrides = dict(folder.project_overrides or {})
current_overrides[str(data.project_id)] = override_data
folder.project_overrides = current_overrides
await session.commit()
await session.refresh(folder)
return {
"id": str(folder.id),
"project_overrides": folder.project_overrides,
}
@router.put("/{folder_id}/overrides/{project_id}", summary="Update project override", description="Update a project override.")
async def update_project_override(
folder_id: uuid.UUID,
project_id: uuid.UUID,
data: ProjectOverrideCreate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
"""Update a project override."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
# Initialize project_overrides if None
if folder.project_overrides is None:
folder.project_overrides = {}
# Update override
current_overrides = dict(folder.project_overrides or {})
override_data = current_overrides.get(str(project_id), {})
if data.mount_path is not None:
override_data["mount_path"] = data.mount_path
if data.files is not None:
override_data["files"] = data.files
current_overrides[str(project_id)] = override_data
folder.project_overrides = current_overrides
# Mark the field as modified to ensure SQLAlchemy detects the change
from sqlalchemy.orm.attributes import flag_modified
flag_modified(folder, "project_overrides")
await session.commit()
await session.refresh(folder)
return {
"id": str(folder.id),
"project_overrides": folder.project_overrides,
}
@router.delete("/{folder_id}/overrides/{project_id}", summary="Remove project override", description="Remove a project override.")
async def remove_project_override(
folder_id: uuid.UUID,
project_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> None:
"""Remove a project override."""
folder = await session.get(ConfigFolder, folder_id)
if folder is None or folder.user_id != user_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="config folder not found")
# Remove override if exists
current_overrides = dict(folder.project_overrides or {})
if str(project_id) in current_overrides:
del current_overrides[str(project_id)]
folder.project_overrides = current_overrides
await session.commit()
await session.refresh(folder)
return {
"id": str(folder.id),
"project_overrides": folder.project_overrides or {},
}
@@ -5,9 +5,9 @@ from sqlalchemy import func, select
from sqlalchemy.ext.asyncio import AsyncSession
from src.auth.dependencies import get_current_user_id, get_db_session
from src.models import GitRepository
from src.models.git_repository import GitRepository
from src.models.project import Project
from src.models import SSHKey
from src.models.ssh_key import SSHKey
router = APIRouter(prefix="/dashboard", tags=["dashboard"])
File diff suppressed because it is too large Load Diff
@@ -4,17 +4,12 @@ import time
from datetime import datetime, timezone
from typing import Any
from fastapi import APIRouter
from fastapi import APIRouter, status
from pydantic import BaseModel, Field
from sqlalchemy import text
from src.config import Settings
from src.database import SessionLocal
from src.schemas.system import (
DatabaseHealth,
DatabaseHealthResponse,
DiskHealth,
HealthChecks,
HealthResponse,
)
router = APIRouter()
@@ -22,6 +17,45 @@ router = APIRouter()
_start_time = time.time()
class DatabaseHealth(BaseModel):
"""Database health check result."""
status: str = Field(description="Database health status", examples=["healthy"])
response_time_ms: float = Field(description="Query response time in milliseconds", examples=[5.2])
class DiskHealth(BaseModel):
"""Disk space health check result."""
status: str = Field(description="Disk health status", examples=["healthy"])
free_gb: float = Field(description="Free disk space in GB", examples=[45.2])
total_gb: float = Field(description="Total disk space in GB", examples=[100.0])
class HealthChecks(BaseModel):
"""Individual health checks."""
database: DatabaseHealth | None = None
disk: DiskHealth | None = None
class HealthResponse(BaseModel):
"""Overall health check response."""
status: str = Field(description="Overall health status", examples=["healthy"])
timestamp: str = Field(description="ISO 8601 timestamp", examples=["2026-05-19T12:00:00Z"])
version: str = Field(description="API version", examples=["0.1.0"])
checks: HealthChecks = Field(description="Individual health checks")
uptime_seconds: float = Field(description="Server uptime in seconds", examples=[3600.0])
class DatabaseHealthResponse(BaseModel):
"""Database-specific health check response."""
status: str = Field(description="Database health status", examples=["healthy"])
response_time_ms: float = Field(description="Query response time in milliseconds", examples=[5.2])
@router.get(
"/health",
response_model=HealthResponse,
@@ -2,14 +2,15 @@
import logging
import uuid
from typing import Any
import httpx
from fastapi import APIRouter, Depends, HTTPException, Request, Response, status
from sqlalchemy.ext.asyncio import AsyncSession
from src.auth.dependencies import get_current_user_id, get_db_session
from src.models import ToolInstance
from src.models import ToolType
from src.models.tool_instance import ToolInstance
from src.models.tool_type import ToolType
logger = logging.getLogger(__name__)
-22
View File
@@ -1,22 +0,0 @@
# apps/api/src/api/project (index)
dir: apps/api/src/api/project
## role
Provides FastAPI REST API endpoints for project and Git repository management, serving as the HTTP interface layer for the project's core domain operations.
## parent
index: apps/api/src/api/.pi-map.index.md
map: apps/api/src/api/.pi-map.md
## children
-
## files
- __init__.py
- git_repositories.py
- projects.py
## links
index: apps/api/src/api/project/.pi-map.index.md
map: apps/api/src/api/project/.pi-map.md
## workflows
- change project behavior
read: __init__.py, git_repositories.py, projects.py
## dirty
-
File diff suppressed because one or more lines are too long
-6
View File
@@ -1,6 +0,0 @@
"""Project API routers module."""
from src.api.project.git_repositories import router as git_repositories_router
from src.api.project.projects import router as projects_router
__all__ = ["git_repositories_router", "projects_router"]
@@ -1,500 +0,0 @@
import logging
import os
import shutil
import uuid
from fastapi import APIRouter, Depends, HTTPException, Response, status
from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from src.auth.dependencies import (
_get_owned_project,
_get_user,
get_current_user_id,
get_db_session,
)
from src.models import GitRepository, SSHKey
from src.schemas.project.git_repository import (
BranchCreateRequest,
BranchesResponse,
CheckoutRequest,
CommitRequest,
CommitResponse,
FetchResponse,
FileContentResponse,
FileListResponse,
FileUpdateRequest,
FileUpdateResponse,
GitRepositoryCreate,
GitRepositoryResponse,
MergeRequest,
MergeResponse,
PullResponse,
PushResponse,
StatusResponse,
UpdateSSHKeyRequest,
URLParseRequest,
URLParseResponse,
)
from src.services.git.operations import (
clone_working_repository,
get_repo_path,
init_working_repository,
list_remote_branches,
preflight_remote_repository,
)
from src.utils.git_control import (
checkout_branch,
commit_changes,
create_branch,
delete_branch,
fetch,
get_status,
merge,
pull,
push,
)
from src.utils.git_files import commit_file, get_file_content, list_branches, list_tree
from src.utils.git_history import get_commit_detail, get_commit_history
from src.utils.git_url_parser import parse_git_url
router = APIRouter(prefix="/projects", tags=["git-repositories"])
logger = logging.getLogger(__name__)
async def _get_repo(
session: AsyncSession, user_id: uuid.UUID, project_id: uuid.UUID, repo_id: uuid.UUID
) -> GitRepository:
_user = await _get_user(session, user_id)
_project = await _get_owned_project(project_id, user_id, session)
repo = await session.get(GitRepository, repo_id)
if repo is None or repo.project_id != project_id:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="repository not found")
return repo
async def _get_repo_on_disk(
session: AsyncSession, user_id: uuid.UUID, project_id: uuid.UUID, repo_id: uuid.UUID
) -> GitRepository:
repo = await _get_repo(session, user_id, project_id, repo_id)
if not os.path.exists(repo.path):
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="repository not found on disk")
return repo
def _parse_remote_url(remote_url: str | None, force_original: bool) -> str | None:
if not remote_url or force_original:
return remote_url
parse_result = parse_git_url(remote_url)
if parse_result["needs_parsing"] and parse_result["base_url"]:
raise HTTPException(
status_code=status.HTTP_422_UNPROCESSABLE_ENTITY,
detail={
"message": "The provided URL appears to be a browser URL, not a git clone URL",
"suggested_url": parse_result["base_url"],
"original_url": remote_url,
"error_code": "URL_NEEDS_PARSING",
},
)
return parse_result.get("base_url") or remote_url
async def _commit_author(session: AsyncSession, user_id: uuid.UUID) -> tuple[str, str]:
user = await _get_user(session, user_id)
return user.name or "Unknown", user.email or "unknown@example.com"
@router.get("/repositories", response_model=list[GitRepositoryResponse])
async def list_user_repositories(
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> list[GitRepository]:
"""List all repositories owned by the user."""
result = await session.execute(select(GitRepository).where(GitRepository.owner_id == user_id))
return list(result.scalars().all())
@router.post("/repositories/parse-url", response_model=URLParseResponse)
async def parse_repository_url(data: URLParseRequest) -> URLParseResponse:
"""Parse a git URL and detect if it's a browser URL that needs correction."""
return URLParseResponse(**parse_git_url(data.url))
@router.post("/repositories", response_model=GitRepositoryResponse, status_code=status.HTTP_201_CREATED)
async def create_external_repository(
data: GitRepositoryCreate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> GitRepository:
"""Create a new external git repository (not tied to any project)."""
_user = await _get_user(session, user_id)
existing = await session.execute(
select(GitRepository).where(
GitRepository.project_id.is_(None),
GitRepository.owner_id == user_id,
GitRepository.name == data.name,
)
)
if existing.scalar_one_or_none():
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="repository name already exists")
remote_url = _parse_remote_url(data.remote_url, data.force_original_url)
ssh_key_id, ssh_key = None, None
if data.ssh_key_id:
try:
ssh_key_id = uuid.UUID(data.ssh_key_id)
except ValueError:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="invalid ssh_key_id format")
ssh_key = await session.get(SSHKey, ssh_key_id)
if ssh_key is None:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="ssh key not found")
if ssh_key.user_id != user_id:
raise HTTPException(status_code=status.HTTP_403_FORBIDDEN, detail="ssh key does not belong to user")
if remote_url:
preflight_remote_repository(remote_url, ssh_key)
repo = GitRepository(name=data.name, path="", project_id=None, owner_id=user_id, remote_url=remote_url, ssh_key_id=ssh_key_id)
session.add(repo)
await session.flush()
repo_path = f"/data/repos/external/{user_id}/{repo.id}"
repo.path = repo_path
if remote_url:
try:
clone_working_repository(remote_url, repo_path, ssh_key)
repo.is_mirror = False
except Exception as exc:
await session.rollback()
raise HTTPException(status_code=status.HTTP_500_INTERNAL_SERVER_ERROR, detail=f"Failed to clone repository: {exc}")
else:
init_working_repository(repo_path)
repo.is_mirror = False
await session.commit()
return repo
@router.get("/{project_id}/repositories", response_model=list[GitRepositoryResponse])
async def list_repositories(
project_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> list[GitRepository]:
_user = await _get_user(session, user_id)
_project = await _get_owned_project(project_id, user_id, session)
result = await session.execute(select(GitRepository).where(GitRepository.project_id == project_id))
return list(result.scalars().all())
@router.delete("/{project_id}/repositories/{repo_id}", status_code=status.HTTP_204_NO_CONTENT)
async def delete_repository(
project_id: uuid.UUID, repo_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> Response:
repo = await _get_repo(session, user_id, project_id, repo_id)
if os.path.exists(repo.path):
shutil.rmtree(repo.path)
await session.delete(repo)
await session.commit()
return Response(status_code=status.HTTP_204_NO_CONTENT)
@router.post("/{project_id}/repositories", response_model=GitRepositoryResponse, status_code=status.HTTP_201_CREATED)
async def create_repository(
project_id: uuid.UUID,
data: GitRepositoryCreate,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> GitRepository:
"""Create a new git repository in a project."""
_user = await _get_user(session, user_id)
_project = await _get_owned_project(project_id, user_id, session)
existing = await session.execute(
select(GitRepository).where(GitRepository.project_id == project_id, GitRepository.name == data.name)
)
if existing.scalar_one_or_none():
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="repository name already exists")
remote_url = _parse_remote_url(data.remote_url, data.force_original_url)
ssh_key_id, ssh_key = None, None
if data.ssh_key_id:
try:
ssh_key_id = uuid.UUID(data.ssh_key_id)
except ValueError:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="invalid ssh_key_id format")
ssh_key = await session.get(SSHKey, ssh_key_id)
if ssh_key is None:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="ssh key not found")
if ssh_key.user_id != user_id and ssh_key.project_id != project_id:
raise HTTPException(status_code=status.HTTP_403_FORBIDDEN, detail="ssh key does not belong to user or project")
if remote_url:
preflight_remote_repository(remote_url, ssh_key)
repo_path = get_repo_path(user_id, project_id, data.name)
os.makedirs(os.path.dirname(repo_path), exist_ok=True)
if remote_url:
clone_working_repository(remote_url, repo_path, ssh_key)
else:
init_working_repository(repo_path)
repo = GitRepository(
name=data.name, path=repo_path, project_id=project_id, owner_id=user_id,
is_mirror=False, remote_url=remote_url, ssh_key_id=ssh_key_id,
)
session.add(repo)
await session.commit()
await session.refresh(repo)
return repo
@router.patch("/{project_id}/repositories/{repo_id}/ssh-key", response_model=GitRepositoryResponse)
async def update_repository_ssh_key(
project_id: uuid.UUID, repo_id: uuid.UUID, data: UpdateSSHKeyRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> GitRepository:
repo = await _get_repo(session, user_id, project_id, repo_id)
if data.ssh_key_id:
try:
ssh_key_id = uuid.UUID(data.ssh_key_id)
except ValueError:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail="invalid ssh_key_id format")
ssh_key = await session.get(SSHKey, ssh_key_id)
if ssh_key is None:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="ssh key not found")
if ssh_key.user_id != user_id and ssh_key.project_id != project_id:
raise HTTPException(status_code=status.HTTP_403_FORBIDDEN, detail="ssh key does not belong to user or project")
repo.ssh_key_id = ssh_key_id
else:
repo.ssh_key_id = None
await session.commit()
await session.refresh(repo)
return repo
@router.get("/{project_id}/repositories/{repo_id}/history")
async def get_repository_history(
project_id: uuid.UUID, repo_id: uuid.UUID,
view: str = "graph", branch: str | None = None, limit: int = 100, offset: int = 0,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
return get_commit_history(repo.path, branch=branch, limit=limit, offset=offset)
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_500_INTERNAL_SERVER_ERROR, detail=str(e))
@router.get("/{project_id}/repositories/{repo_id}/commits/{commit_hash}")
async def get_repository_commit(
project_id: uuid.UUID, repo_id: uuid.UUID, commit_hash: str,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
return get_commit_detail(repo.path, commit_hash)
except (RuntimeError, ValueError) as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.get("/{project_id}/repositories/{repo_id}/files", response_model=FileListResponse)
async def list_repository_files(
project_id: uuid.UUID, repo_id: uuid.UUID, branch: str = "main", path: str = "",
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> FileListResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
entries = list_tree(repo.path, branch=branch, path=path)
return FileListResponse(path=path, branch=branch, entries=[
{"name": e.name, "type": e.type, "path": e.path, "size": e.size, "mode": e.mode, "last_commit": e.last_commit}
for e in entries
])
except RuntimeError as e:
logger.error("Failed to list files for repo %s: %s", repo_id, str(e))
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.get("/{project_id}/repositories/{repo_id}/files/content", response_model=FileContentResponse)
async def get_repository_file_content(
project_id: uuid.UUID, repo_id: uuid.UUID, branch: str, path: str,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> FileContentResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
fc = get_file_content(repo.path, branch=branch, path=path)
return FileContentResponse(path=fc.path, branch=fc.branch, content=fc.content, size=fc.size,
encoding=fc.encoding, language=fc.language, is_binary=fc.is_binary, last_commit=fc.last_commit)
except FileNotFoundError:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="file not found")
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.get("/{project_id}/repositories/{repo_id}/branches", response_model=BranchesResponse)
async def get_repository_branches(
project_id: uuid.UUID, repo_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> BranchesResponse:
repo = await _get_repo(session, user_id, project_id, repo_id)
is_valid = os.path.isdir(os.path.join(repo.path, ".git")) or os.path.isfile(os.path.join(repo.path, "HEAD"))
if is_valid:
try:
branches, default_branch = list_branches(repo.path)
return BranchesResponse(branches=[
{"name": b.name, "is_default": b.is_default, "last_commit": b.last_commit} for b in branches
], default_branch=default_branch)
except RuntimeError as e:
logger.error("Failed to list branches for repo %s: %s", repo_id, str(e))
raise HTTPException(status_code=status.HTTP_500_INTERNAL_SERVER_ERROR, detail=str(e)) from e
if repo.remote_url:
ssh_key = await session.get(SSHKey, repo.ssh_key_id) if repo.ssh_key_id else None
try:
remote_branches, default_branch = list_remote_branches(repo.remote_url, ssh_key)
if remote_branches:
return BranchesResponse(branches=[
{"name": b, "is_default": b == default_branch, "last_commit": None} for b in remote_branches
], default_branch=default_branch)
except RuntimeError:
pass
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="repository not found on disk — re-clone or re-create the repository")
@router.post("/{project_id}/repositories/{repo_id}/files/content", response_model=FileUpdateResponse)
async def update_repository_file(
project_id: uuid.UUID, repo_id: uuid.UUID, data: FileUpdateRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> FileUpdateResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
author_name, author_email = await _commit_author(session, user_id)
try:
commit_hash = commit_file(repo.path, data.branch, data.path, data.content, data.commit_message, author_name, author_email)
return FileUpdateResponse(commit_hash=commit_hash, message=data.commit_message, branch=data.branch)
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.get("/{project_id}/repositories/{repo_id}/status", response_model=StatusResponse)
async def get_repository_status(
project_id: uuid.UUID, repo_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> StatusResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
s = get_status(repo.path)
return StatusResponse(branch=s.branch, modified=s.modified, added=s.added, deleted=s.deleted,
untracked=s.untracked, renamed=s.renamed, ahead=s.ahead, behind=s.behind)
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/branches")
async def create_repository_branch(
project_id: uuid.UUID, repo_id: uuid.UUID, data: BranchCreateRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
create_branch(repo.path, data.name, data.base_branch)
return {"message": f"Branch '{data.name}' created", "branch": data.name}
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.delete("/{project_id}/repositories/{repo_id}/branches/{branch_name}")
async def delete_repository_branch(
project_id: uuid.UUID, repo_id: uuid.UUID, branch_name: str, force: bool = False,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
delete_branch(repo.path, branch_name, force)
return {"message": f"Branch '{branch_name}' deleted"}
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/checkout")
async def checkout_repository_branch(
project_id: uuid.UUID, repo_id: uuid.UUID, data: CheckoutRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> dict:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
checkout_branch(repo.path, data.branch)
return {"message": f"Checked out branch '{data.branch}'", "branch": data.branch}
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/commit", response_model=CommitResponse)
async def commit_repository_changes(
project_id: uuid.UUID, repo_id: uuid.UUID, data: CommitRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> CommitResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
author_name, author_email = await _commit_author(session, user_id)
try:
commit_hash = commit_changes(repo.path, data.message, author_name, author_email, data.files)
return CommitResponse(commit_hash=commit_hash, message=data.message)
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/fetch", response_model=FetchResponse)
async def fetch_repository(
project_id: uuid.UUID, repo_id: uuid.UUID,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> FetchResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
fetch(repo.path)
return FetchResponse(message="Fetched from remote")
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/pull", response_model=PullResponse)
async def pull_repository(
project_id: uuid.UUID, repo_id: uuid.UUID, branch: str | None = None,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> PullResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
pull(repo.path, branch)
return PullResponse(message="Pulled from remote")
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/push", response_model=PushResponse)
async def push_repository(
project_id: uuid.UUID, repo_id: uuid.UUID, branch: str | None = None,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> PushResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
push(repo.path, branch)
return PushResponse(message="Pushed to remote")
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@router.post("/{project_id}/repositories/{repo_id}/merge", response_model=MergeResponse)
async def merge_repository_branches(
project_id: uuid.UUID, repo_id: uuid.UUID, data: MergeRequest,
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> MergeResponse:
repo = await _get_repo_on_disk(session, user_id, project_id, repo_id)
try:
commit_hash = merge(repo.path, data.source_branch, data.target_branch, data.message)
return MergeResponse(commit_hash=commit_hash, message=data.message or f"Merge {data.source_branch}")
except RuntimeError as e:
raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(e))
@@ -3,29 +3,51 @@ import shutil
import uuid
from fastapi import APIRouter, Depends, HTTPException, Response, status
from sqlalchemy import func, select
from pydantic import BaseModel, ConfigDict
from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from src.auth.dependencies import (
_get_owned_project,
_get_user,
get_current_user_id,
get_db_session,
)
from src.models import GitRepository
from src.auth.dependencies import get_current_user_id, get_db_session
from src.models.git_repository import GitRepository
from src.models.project import Project
from src.models import SSHKey
from src.models import ToolInstance
from src.schemas.project import (
ProjectCreate,
ProjectResponse,
ProjectUpdate,
SetDefaultSSHKeyRequest,
)
from src.models.ssh_key import SSHKey
from src.models.user import User
router = APIRouter(prefix="/projects", tags=["projects"])
async def _get_user(session: AsyncSession, user_id: uuid.UUID) -> User:
"""Fetch a user by ID or raise 401 if not found."""
user = await session.get(User, user_id)
if user is None:
raise HTTPException(status_code=status.HTTP_401_UNAUTHORIZED, detail="user not found")
return user
class ProjectCreate(BaseModel):
name: str
description: str | None = None
class ProjectUpdate(BaseModel):
name: str | None = None
description: str | None = None
class ProjectResponse(BaseModel):
model_config = ConfigDict(from_attributes=True)
id: uuid.UUID
name: str
description: str | None
owner_id: uuid.UUID
default_ssh_key_id: uuid.UUID | None
class SetDefaultSSHKeyRequest(BaseModel):
ssh_key_id: uuid.UUID
@router.post(
"",
response_model=ProjectResponse,
@@ -63,77 +85,26 @@ async def create_project(
@router.get(
"",
response_model=list[ProjectResponse],
summary="List all projects",
description="Retrieve all projects owned by the authenticated user with repositories and workspaces.",
description="Retrieve all projects owned by the authenticated user.",
)
async def list_projects(
user_id: uuid.UUID = Depends(get_current_user_id),
session: AsyncSession = Depends(get_db_session),
) -> list[dict]:
) -> list[Project]:
"""List all projects for the authenticated user.
Returns projects with nested repositories and workspaces for inline display.
Args:
user_id: ID of the authenticated user.
session: Database session.
Returns:
List of projects owned by the user.
"""
user = await _get_user(session, user_id)
result = await session.execute(
select(Project)
.where(Project.owner_id == user.id)
.order_by(Project.created_at.desc())
)
projects = result.scalars().all()
from src.models import Workspace
enriched = []
for project in projects:
repos_result = await session.execute(
select(GitRepository).where(GitRepository.project_id == project.id)
)
repositories = []
for repo in repos_result.scalars().all():
ws_result = await session.execute(
select(Workspace).where(Workspace.repo_id == repo.id)
)
workspaces = []
for ws in ws_result.scalars().all():
# Count instances
inst_result = await session.execute(
select(func.count()).where(ToolInstance.workspace_id == ws.id)
)
instance_count = inst_result.scalar() or 0
workspaces.append(
{
"id": str(ws.id),
"name": ws.name,
"branch": ws.branch,
"status": ws.status,
"instance_count": instance_count,
}
)
repositories.append(
{
"id": str(repo.id),
"name": repo.name,
"remote_url": repo.remote_url,
"workspaces": workspaces,
}
)
enriched.append(
{
"id": str(project.id),
"name": project.name,
"description": project.description,
"owner_id": str(project.owner_id),
"repositories": repositories,
"created_at": project.created_at.isoformat()
if project.created_at
else None,
}
)
return enriched
result = await session.execute(select(Project).where(Project.owner_id == user.id))
return list(result.scalars().all())
@router.get(
@@ -161,6 +132,32 @@ async def get_project(
return await _get_owned_project(project_id, user_id, session)
async def _get_owned_project(
project_id: uuid.UUID,
user_id: uuid.UUID,
session: AsyncSession,
) -> Project:
"""Fetch a project and verify ownership.
Args:
project_id: UUID of the project.
user_id: ID of the authenticated user.
session: Database session.
Returns:
The project if found and owned by the user.
Raises:
HTTPException: If project not found or user is not the owner.
"""
project = await session.get(Project, project_id)
if project is None:
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="project not found")
if project.owner_id != user_id:
raise HTTPException(status_code=status.HTTP_403_FORBIDDEN, detail="not project owner")
return project
@router.patch(
"/{project_id}",
response_model=ProjectResponse,
@@ -222,9 +219,7 @@ async def delete_project(
project = await _get_owned_project(project_id, user_id, session)
# Delete repositories from disk and database
result = await session.execute(
select(GitRepository).where(GitRepository.project_id == project_id)
)
result = await session.execute(select(GitRepository).where(GitRepository.project_id == project_id))
repositories = result.scalars().all()
for repo in repositories:
if os.path.exists(repo.path):

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